Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01341 ATGGGTTCGATGGAGATAGACGAGGAGGTGTCGCCGATCGAGGAGGTGCGTCTGGTGGTGTCGAACGAGGACGACCCCGGGCAGCCGGTGTGGACGTTTCGGATGTGGTTCATGGGCGTGGCGTCGGTGTCGCTGCTTTCGTTCCTCAACACTTTCTTCGGCTACAGGACAGAGCCGCTCACGGTCACCATGATTTCGGTGCAGGTGGCCACGCTTCCGATCGGGCGGTTCATGGCCAGGGTGCTTCCCACGAGGAAGTTTCGCATCGGAGGGAGGGCCTTCTCGCTCAACCCTGGCCCCTTCAACATGAAGGAGCACGTGCTCATTTCGATATTCGCGAATGCTGGCGCCGCGTTTGGGAACGGTTCTGCCTACGCTATCAGCATTGTGGATATAATCCGCGCCTTCTATGGCAGGAAGATTAGCTTCTTGGCGAGTTGGCTCCTCGTCATGACCACGCAGGTGTTGGGATACGGATGGGCGGGGATCATGAAGAAGTACGTGGTGGAGCCAGCGCAGATGTGGTGGCCTGCCACCCTAGTGCAAGTCTCTCTCTTCAGGGCCTTGCATGAAAAAGAACGGAGGCGCATGTCAAAAGAGAAATTCTTTTTGATCGCACTTATTTGCAGCTTCGCGTGGTACGTGGTACCTGGGTTCCTATTTCCGACACTGTCAATTATTTCGTGGGTGTGTTGGATTTTTCCCCGCTCAGTAACTGCCCATCAGATTGGATCAGGCAAGAGTGGACTTGGCTTGGGTTCCTTCTCCCTTGACTGGACCACCGTTGCTGCATTCCTTGGCAATCCACTCGTCACTCCTTTCTTTGCAACAGCTAACATCATTGTCGGTTACGTCTTATTAGTATACCTCCTCATACCTGCTGCGTATTGGGGATTTAATCTCTACAATGCCAAGAACTTCCCCATATACTCTTCAAGTCTATTCACTGCCAATGGCCACGGCTACAATGTCACCGCCATTGTGAATCAACACTTTGAGATTGATATGCAGGCATACCTTAAACAAGGTCGAGTCAACTTGAGTGTCTTCTTTGCTATTAGCTATGGCCTTGGCTTTGCTGCCATTGCCTCTTCCCTCACTCATGTCGCCTTGTTTAATGGCAGGGAGATATATCAACAGTTCCGAACTTCCCGCTCTGCAAAGGAAGACATTCACACAAGATTGATGAAGAACTACAAGCAAATACCTGGCTGGTGGTTTCATGTCACGCTTTCGGTTACATTTGTACTTGCACTTGTACTTTGTATTGTCATGAAAGATGAGATACAAATGCCATGGTGGGGTCTCATCTTTGCATCTGGGCTTGCACTAATCTTTACTCTCCCCATTAGCATCATAACTGCCACCACTAATCAGAGTCCAGGTTTGAATATCATTACTGAGTACATCATGGGTGTGATTTTACCTGGCAAGCCAATAGCCAACGTTTGCTTCAAGACATATGGGTACATAAGTATGTCACAGGCTGTTTCCTTTCTATCTGATTTCAAGCTAGGACATTACATGAAGATTCCACCACGCTCCATGTTCATAGTTCAGATCGTAGGGACTCTGATAGCAGGAACCGTGGACGTTGGTGTCGCATGGTGGTTGCTGGGTTCAATAAAGCATATATGCAACCAAGATCTACTGCCCTCGGACAGTCCATGGACCTGCCCGGGTGACAAAGTTTTCTTTGATGCATCTGTGATCTGGGGCTTGGTAGGGCCAAGGCGAATTTTCGGCACTCTTGGGAATTACATACAACTCAATTGGTTCTTCTTAATAGGAGTATTGGGACCACTATTTGTATGGCTATTGCATAAAGCCTTTCCCAATCAACAGTGGATATCCTCAATTCACCTTCCTGTGCTTCTTGGAGCAACTGCCGCAATGCCACCAGCCAGCACAGTGAACTTCAATTCGTGGATTATTGTTGCCACAATCTTCAACTATTATGTATTCAAGTATCGTAAGAATTGGTGGCAGCGCTACAATTATGTGCTAGCGGCAGCTTTGGACGCTGGATTGGCTTTCATGACGGTTCTTCTATACTTCTCACTTAACATGGAGGGAACAAGTATTGAATGGTGGGGAACTGATGAGCACTGTCCCCTTGCCAGGTGTCCAACAGCGAAAGGTATAGTAGATCCTAAAGGGGTCTGTCCTCTGTTTTGA 2178 0.4871 MGSMEIDEEVSPIEEVRLVVSNEDDPGQPVWTFRMWFMGVASVSLLSFLNTFFGYRTEPLTVTMISVQVATLPIGRFMARVLPTRKFRIGGRAFSLNPGPFNMKEHVLISIFANAGAAFGNGSAYAISIVDIIRAFYGRKISFLASWLLVMTTQVLGYGWAGIMKKYVVEPAQMWWPATLVQVSLFRALHEKERRRMSKEKFFLIALICSFAWYVVPGFLFPTLSIISWVCWIFPRSVTAHQIGSGKSGLGLGSFSLDWTTVAAFLGNPLVTPFFATANIIVGYVLLVYLLIPAAYWGFNLYNAKNFPIYSSSLFTANGHGYNVTAIVNQHFEIDMQAYLKQGRVNLSVFFAISYGLGFAAIASSLTHVALFNGREIYQQFRTSRSAKEDIHTRLMKNYKQIPGWWFHVTLSVTFVLALVLCIVMKDEIQMPWWGLIFASGLALIFTLPISIITATTNQSPGLNIITEYIMGVILPGKPIANVCFKTYGYISMSQAVSFLSDFKLGHYMKIPPRSMFIVQIVGTLIAGTVDVGVAWWLLGSIKHICNQDLLPSDSPWTCPGDKVFFDASVIWGLVGPRRIFGTLGNYIQLNWFFLIGVLGPLFVWLLHKAFPNQQWISSIHLPVLLGATAAMPPASTVNFNSWIIVATIFNYYVFKYRKNWWQRYNYVLAAALDAGLAFMTVLLYFSLNMEGTSIEWWGTDEHCPLARCPTAKGIVDPKGVCPLF 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01341 725 PANTHER ISP4 LIKE PROTEIN 6 716 IPR004648 GO:0055085
Cca03g01341 725 PANTHER OLIGOPEPTIDE TRANSPORTER 2 6 716 - -
Cca03g01341 725 Pfam OPT oligopeptide transporter protein 31 687 IPR004813 GO:0035673
Cca03g01341 725 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 14 689 IPR004813 GO:0035673
Cca03g01341 725 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 9 693 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01341 Cca-Chr3 31399856 31406788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01341 5 725 Organic Solute Cotransporters AT1G09930 70.816 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01341 - - gmx:100785973 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01341 03 31399856 31406788 Cca03g01341 03 31399856 31406788 ECH