Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g01333 | ATGAAGGCTTGTGGGAGTAGGAGTGAGACCAGTGAAGAAGTTGCAAATGATTCAGTGGCTTTGGGAGATGTGATATTTATCAAGCTTCGCAGTGGCTCATGGTGGCCTGCGCAGGTTGTTGATGAAAATAGTGTTAATAAGAGTGTTAAACCGAGCAACAGGAGGAAACGATTGCCAGGGGAAGTCCTTGTTAGGCATTATGGAAGTTATACATATTCTTATGCAGATCCTATTAAATATGGTTCTGAGTTTAAGACGATACTTGAGCAAAATGATGGTTCTCTCAGGAAAATACTTCTGCAGGCTCTTGAAAAGGATCTTCCTAGTACAAAATCCCATAGATCAAAGGGGTCATCATCATCAAAGCCTAAAGGAACTTCAAGCAAAAATGCCGCAGGCAAGCGAAAATCCAATGGGCAAGATGAGGAGCAGAACACAATCAAGCGCCAAAAGCAAAAGGAGACATTGGATGGTGATGCTAGCCAAAGTCATGAAACGAACTCGTTAGGGAAGTCCCCAGAGTTGAGTTCCAGGAGGATAAGAGTGATGGAAAACCTTGGACTCATTGCTCCAGCTGGATCACCATTCCAAAAAAAATGCACATAA | 606 | 0.429 | MKACGSRSETSEEVANDSVALGDVIFIKLRSGSWWPAQVVDENSVNKSVKPSNRRKRLPGEVLVRHYGSYTYSYADPIKYGSEFKTILEQNDGSLRKILLQALEKDLPSTKSHRSKGSSSSKPKGTSSKNAAGKRKSNGQDEEQNTIKRQKQKETLDGDASQSHETNSLGKSPELSSRRIRVMENLGLIAPAGSPFQKKCT | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g01333 | 201 | MobiDBLite | consensus disorder prediction | 135 | 160 | - | - | |
| Cca03g01333 | 201 | Pfam | PWWP domain | 22 | 80 | IPR000313 | - | |
| Cca03g01333 | 201 | PANTHER | OS08G0477800 PROTEIN | 6 | 152 | - | - | |
| Cca03g01333 | 201 | ProSiteProfiles | PWWP domain profile. | 21 | 74 | IPR000313 | - | |
| Cca03g01333 | 201 | PANTHER | OS08G0477800 PROTEIN | 128 | 199 | - | - | |
| Cca03g01333 | 201 | Gene3D | - | 13 | 157 | - | - | |
| Cca03g01333 | 201 | PANTHER | ALDOLASE-RELATED | 128 | 199 | - | - | |
| Cca03g01333 | 201 | SUPERFAMILY | Tudor/PWWP/MBT | 16 | 141 | - | - | |
| Cca03g01333 | 201 | PANTHER | ALDOLASE-RELATED | 6 | 152 | - | - | |
| Cca03g01333 | 201 | MobiDBLite | consensus disorder prediction | 113 | 134 | - | - | |
| Cca03g01333 | 201 | MobiDBLite | consensus disorder prediction | 106 | 178 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g01333 | - | - | gmx:100815242 | 286.189 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca03g01333 | 03 | 31271097 | 31284870 | Cca03g01333 | 03 | 31271097 | 31284870 | ECH |