Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01328 ATGGTGCGCATGCAGGCCGACGGGCGCGCCCCGCCGGCGGAGCGGCGCAACTACAAGGGCGTGTTGGACGCGATACGGCGAATGATTAACGAGGAAGGGTTGGCTTCGTACGACGAGTTTAAGGAAACCATTCTTGGACGCGGGTGGATGAAGGACGGGATGGGGTGCCACGTGGCAGCGAGTTTTGCGGCGGGTTTTGTGGCGGCTGTTGCGTCCAACCCTATTGATGTTATAAAGACTAGGGTTATGAACATGAAGGCGGAGGCTTACAATGGGGCATTGGATTGTGCTGTTAACACTGTTAGGACTGAAGGACCTCTTGCCCTTTATAAGGGTTTCATCCCTACAATTTCAAGGCAGGGCCCTTTCACTGTTGTCCTCTTTGTCACCCTTGAACAAGTCAGGAACCTGCTCAAGGACTTTTGA 426 0.5399 MVRMQADGRAPPAERRNYKGVLDAIRRMINEEGLASYDEFKETILGRGWMKDGMGCHVAASFAAGFVAAVASNPIDVIKTRVMNMKAEAYNGALDCAVNTVRTEGPLALYKGFIPTISRQGPFTVVLFVTLEQVRNLLKDF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01328 141 Pfam Mitochondrial carrier protein 55 139 IPR018108 -
Cca03g01328 141 ProSiteProfiles Solute carrier (Solcar) repeat profile. 52 137 IPR018108 -
Cca03g01328 141 PANTHER DICARBOXYLATE CARRIER PROTEIN 34 141 - -
Cca03g01328 141 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 34 141 - -
Cca03g01328 141 PANTHER DICARBOXYLATE CARRIER PROTEIN 1 36 - -
Cca03g01328 141 Gene3D Mitochondrial carrier domain 34 140 IPR023395 -
Cca03g01328 141 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 1 36 - -
Cca03g01328 141 SUPERFAMILY Mitochondrial carrier 2 134 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01328 Cca-Chr3 31200809 31201349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01328 1 140 Miscellaneous Gene Families AT5G09470 55.828 3.55e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01328 K15104 - gmx:100790234 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01328 03 31200809 31201349 Cca03g01328 03 31200809 31201349 ECH