Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01326 ATGGATCCCCAAGCCTCCGTGGATCCCCTTCGCGTCAAGAGGAAGACGCTTGAGGCCGTGCTTCTGCACTGTCAGAGAGCTCTCCAATTCATCGACGCTACTTCTTCTCAACTCCCCCAAGAGGATTGCGACGCTGACACTGACGCTGAACCCACTGCATCAGCTGATTCTGACGCCGACCAGTTATGTGATCTGCTCAAATCTAGAGTTGAATGTCCTGCCTTTCTTCAAAAGTTGGAGTGTGCTCAGGTGTCAGTTTTGCAGAATATAGACGAAGAATGTAATTCTTGGGATGTGGTCAGTGAAAATGATCTCTGGGAAGGTGAATGTGATGACTCAGACCAAGAAGATTATGTCCTTGTTAGACAAGAAGATATAGTGGAGGGCATTGCGTGTTTTATGGCCGCATATTTGCTATCCCTCAAGCAGACAAAGGATTTGACCCCTATCCAACTCCAGGAAGCGCTTAGCAAGACATTTTCAGTGAAAAAGAAAAAGGGAAAGCTACGAAAGGCTTGGGATGGGAGCAAAGTTATTTATAATGTTGCATCATGGGGGGCTACAGCCATAGGGATATATCAAAACCCTGTTATTCTTAGGGCTGCAACTAAAGCATTCTGGACTTCTTGTCACGTTATATCAAAGCTTCTCTGA 654 0.4587 MDPQASVDPLRVKRKTLEAVLLHCQRALQFIDATSSQLPQEDCDADTDAEPTASADSDADQLCDLLKSRVECPAFLQKLECAQVSVLQNIDEECNSWDVVSENDLWEGECDDSDQEDYVLVRQEDIVEGIACFMAAYLLSLKQTKDLTPIQLQEALSKTFSVKKKKGKLRKAWDGSKVIYNVASWGATAIGIYQNPVILRAATKAFWTSCHVISKLL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01326 217 PANTHER RING FINGER PROTEIN 6 217 - -
Cca03g01326 217 PANTHER RING FINGER PROTEIN 6 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01326 Cca-Chr3 31154540 31158071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01326 - - ccaj:109798117 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01326 03 31154540 31158071 Cca03g01326 03 31154540 31158071 ECH