Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01322 ATGGCTTCCACACTCTGCTCCATCTCTACTTCGCCCCTTTTCTCCTCCTCCACGCTACGACGTCGTCTTCCCTTAGTCGGTGCGTTTTGCATGCTCAGTTTGGGACTCTCAAATCTCTACACACCGTTATACTCCTCTGCCCTCAAAACGGGATCCAAATTGGGTGTCCACACCAAGTCCACCATCAGAATGGAAGGGAGTAACACCACTGTCCCCAGCATTGTTGTCTACGTCACTGTTCCCAACAAAGAAGCAGGTAAGAACTTGGCTGAAAGCATCGTCCAAGAGAAGCTTGCAGCTTGTGTCAACAGGGTACCGGGTATTGAATCAATGTACCAGTGGGAGGGAAAGATCCAGACTGATTCTGAGGAGCTTCTTATAATCAAGACTAGGCAATCCCTTCTGGAGGCACTGACAGAGCATATCAAAGCAAATCATCAATATGAAGTGCCTGAGGTGATCTCCTTACCCATCACTGGCGGAAATCTTAAATATTTAGAATGGATTAAAGAGAGCACAAGGGAGTGA 528 0.4754 MASTLCSISTSPLFSSSTLRRRLPLVGAFCMLSLGLSNLYTPLYSSALKTGSKLGVHTKSTIRMEGSNTTVPSIVVYVTVPNKEAGKNLAESIVQEKLAACVNRVPGIESMYQWEGKIQTDSEELLIIKTRQSLLEALTEHIKANHQYEVPEVISLPITGGNLKYLEWIKESTRE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01322 175 Pfam CutA1 divalent ion tolerance protein 74 171 IPR004323 GO:0010038
Cca03g01322 175 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 17 174 IPR004323 GO:0010038
Cca03g01322 175 SUPERFAMILY GlnB-like 73 174 IPR011322 -
Cca03g01322 175 Gene3D - 52 174 IPR015867 -
Cca03g01322 175 PANTHER PROTEIN CUTA CHLOROPLASTIC 17 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01322 K03926 - gmx:100792337 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01322 03 31130728 31134781 Cca03g01322 03 31130728 31134781 ECH