Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01273 ATGGCGAGCGCGCTCGAAACCCTCTGCGGCCAAGCCTACGGCGCCGGACACCACCGCATGCTGGGCGTTTACTTGCAACGCTCCTGGCTCGTCCTCTTCCTCTCGTCGATCCTCATGCTGCCGATTTTCGTGTTCGCCGCGCCGCTGCTGAAGCTGGTGGGTCAGCCCGTCGCGGTGGCGGAGCAGGCGGGGCTGGTGGCGGTTTGGCTGATCCCGTTTCACCTCAGCTTCCCGTTTCAGTTCACGCTGCAGCGGTTCTTGCAGTGCCAGTTGAAGACCGCAATCGTTGCTTGGGTTTCGGGGGTGGCCCTTGCGATCCACGTGTTAGTGAGTTGGGTTTTTGTTTATAGAATGAGGATTGGGATCGTTGGCACTGCCCTTACCATTGGTTTCTCGTGGTGGATCTCGGTTTTGGGGCTGCTCGGGTATACCCTGTTTGGTGGGTGCCCCGATTCGTGGAGTGGCTTTTCTTCTGAAGCTTTCGTTGGCCTTTGGGATTTTTTCAAACTCGCTTTGGCTTCTGGGCTCATGCTTGCGTTAGAGAATTTCTATTACAGACTGTTGCTTATAGTGTCTGGGTATATGCGTAACACTGAGATTGCAATTGATGCTCTTTCTGTTTGTGTGACGATTTATGGTTGGGAATCCATGATACCGCTTGCATTTTTGGGTGCAACCGGGTATGTCATTGTTGGTGCGTGTAGCAAACGAGCTTGGCGCAGGCAATGCAGAAGGTGCAAAATTTGCAACTGTGGTTTCTGTGGTAATTACTGTACTGGTGGGATTTGTATTTTGGTTGATTATCCTCTTCTTCAACAAGAATCTTGCCTTGATCTTTACATCGAGCTCGTCTGTTATCCAAATGGTCAATGA 873 0.5178 MASALETLCGQAYGAGHHRMLGVYLQRSWLVLFLSSILMLPIFVFAAPLLKLVGQPVAVAEQAGLVAVWLIPFHLSFPFQFTLQRFLQCQLKTAIVAWVSGVALAIHVLVSWVFVYRMRIGIVGTALTIGFSWWISVLGLLGYTLFGGCPDSWSGFSSEAFVGLWDFFKLALASGLMLALENFYYRLLLIVSGYMRNTEIAIDALSVCVTIYGWESMIPLAFLGATGYVIVGACSKRAWRRQCRRCKICNCGFCGNYCTGGICILVDYPLLQQESCLDLYIELVCYPNGQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01273 290 Pfam MatE 1 113 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Cca03g01273 290 PANTHER PROTEIN DETOXIFICATION 1 229 - -
Cca03g01273 290 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01273 Cca-Chr3 30258974 30266703 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01273 K03327 - gmx:100814869 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01273 03 30258974 30266703 Cca03g01273 03 30258974 30266703 ECH