Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01271 ATGGCCAATAGGAAGAGGCTAAAAAACTTGACCCAAACTCTGAAAGACAAAGCCTCCGTCATCGCCGCAGCGCTATCCACTCACCGCCACGTGTCCTCCATCCGCGTCCACGTCCTCCGCGCCACCACGCACGCCCTCTCCGCCCCTCCCTCCGAGGACTCCATCGCCGCCGTCCTCGCCGTCGGCCACGCCTCCCACCGCCACCCCCGCGCATGCATCGACGCGCTCATGGATCGCCTCCACCGCACGCGCAGCGCCACCGTCGCCCTCAAGTGCCTATACACGCTCCACAACGTCGTCGTGAAGGGATCCTTCGTCCTCAAAGACCAACTCTCCAGTTACCCCTCCTACGGCGGCCCCAATTTTCTCAACCTCTCCACTTTCCGCGACGACTCGGACCTTGAATCGGTGGAACTCAGTTCGTGGGTTCGGTGGTACGCCGCCGTTTTGGAACACTCTTTGACCGTTTCCAGAGTCTTGGGGTATTATTACTTGCAAGAAaataaaaagaatgataatattaataataataataataaGTGTTTGGTTTGGGCGGCGTCGAACGCTGATTTGTTGTACAAGTTGGAAGCGTTGGTGGGTTTTGTTGAGGAAATAAGTCACGTGCCGGAATCGCTGGAGCTTCAGCGGAAGGAGTTGGTGTACGAGGTGGTGAGATTGGTGGGTGAGAATTATAGGTGCGTGCAGGGTGAGATTATCATACGGTTGGAAGAGGTTGGGGGGAGAGTAATGGATGTGGGAGAGTTGAATGAGATGTTGGGGTATTTGGCGAGATTGGAGGAGAGTCACGAGAAGTTGCTGCTTTTGTTTGTGAATAGGACAAAGAACAATGGGTTTTGGGATTTGGTCGAGAACACCAAACTCAAGGCTATACACAAGAAGAAGGAGATCGAAGGGAAGTGGCTCACGGTGGTTACTGGCGGTAACGTGCTCGAGTTCACTCGGTCTACCAACCCGTTTCTTGACCCGGGGCAACTCAGTCCGGTCCCACGGTTAAGTTTCGCAACGGTAAGTCTGCGCCTTCCAGTTGGAGGCCTGGTGGTATGCTTTTTCATATTTTTTGGTGGATGTGGGCCTTGTGGGCCTCCATGTCTGCCGTCGTCTGCATGA 1128 0.5355 MANRKRLKNLTQTLKDKASVIAAALSTHRHVSSIRVHVLRATTHALSAPPSEDSIAAVLAVGHASHRHPRACIDALMDRLHRTRSATVALKCLYTLHNVVVKGSFVLKDQLSSYPSYGGPNFLNLSTFRDDSDLESVELSSWVRWYAAVLEHSLTVSRVLGYYYLQENKKNDNINNNNNKCLVWAASNADLLYKLEALVGFVEEISHVPESLELQRKELVYEVVRLVGENYRCVQGEIIIRLEEVGGRVMDVGELNEMLGYLARLEESHEKLLLLFVNRTKNNGFWDLVENTKLKAIHKKKEIEGKWLTVVTGGNVLEFTRSTNPFLDPGQLSPVPRLSFATVSLRLPVGGLVVCFFIFFGGCGPCGPPCLPSSA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01271 375 SUPERFAMILY ENTH/VHS domain 33 164 IPR008942 -
Cca03g01271 375 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Cca03g01271 375 CDD ANTH_N_AP180_plant 34 157 - -
Cca03g01271 375 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 337 - -
Cca03g01271 375 SMART enth_2 32 164 IPR013809 -
Cca03g01271 375 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 337 IPR045192 GO:0048268|GO:0072583
Cca03g01271 375 Gene3D - 5 164 IPR008942 -
Cca03g01271 375 Pfam ANTH domain 35 206 IPR011417 GO:0005543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01271 - - gmx:100788852 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01271 03 30196524 30197739 Cca03g01271 03 30196524 30197739 ECH