Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01245 ATGGCAACTTTCACTCACTCCCTTCTCACACTCTCTCTCCTCGTGTCCATCTTTCACCTCTCCTTCGCTGCAAGGAGGCTGGTTCAGGACAAGGATCAGGATCAGTTACTCCATTACCACAACGGTCCTTTGCTATACGGCAAAATCGCCGTCAACCTCATCTGGTACGGAAAATTCAAGCCATCCCAAAAGGCCATTATCACCGATTTCGTTACCTCACTCTCCTCCCCAGCGTCCCAGAACGCCCAACCCTCTGTTGCCACGTGGTGGAAAACCACCGAGAAATACTACCACCTGAGTTCCAAGAAACCTTCTTCTCTTTCCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCTCACTGGCCGATCAGATTCTGGACGAGGGTTACTCGCTGGGCAAGTCACTAACCAGCAAGCACCTCGTCGAGCTGGCATCCAAGGGGGGACAGAAAAACGCCATCAACGTTGTTCTCACATCCGCTGATGTGGCAGTCGAGGGTTTCTGTATGAGCCGATGTGGCACTCACGGCTCCTCCTCTACAACCTCTCACGTGAAAGACGGAAAGAACTACAAATTCGCTTACATTTGGGTTGGTAACTCGGAAACCCAATGCCCTGGCCAATGTGCGTGGCCCTTCCACCAGCCTATTTATGGACCACAGAGCCCACCGTTGATTGCTCCCAACAACGATGTGGGACTGGACGGAATGGTTATCAACCTTGCCAGTCTCCTGGCCGGAACCGCCACGAACCCTTTCGGAAATGGCTACTTCCAGGGCCCTGCAGAGGCTCCACTGGAAGCGGCATCGGCGTGTCCTGGGGTTTATGGGAAAGGGGCTTACCCTGGTTATGCGGGTGAGTTGTTGGTTGATTCCACAACGGGTGGTAGCTACAATGTGAATGGTGGTAATGGGAGGAAGTACCTTGTTCCTGCTTTGTACGATCCTTCTACTTCGTCTTGCTCAACGCCCGTGTGA 1071 0.4734 MATFTHSLLTLSLLVSIFHLSFAARRLVQDKDQDQLLHYHNGPLLYGKIAVNLIWYGKFKPSQKAIITDFVTSLSSPASQNAQPSVATWWKTTEKYYHLSSKKPSSLSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLADQILDEGYSLGKSLTSKHLVELASKGGQKNAINVVLTSADVAVEGFCMSRCGTHGSSSTTSHVKDGKNYKFAYIWVGNSETQCPGQCAWPFHQPIYGPQSPPLIAPNNDVGLDGMVINLASLLAGTATNPFGNGYFQGPAEAPLEAASACPGVYGKGAYPGYAGELLVDSTTGGSYNVNGGNGRKYLVPALYDPSTSSCSTPV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01245 356 Coils Coil 109 109 - -
Cca03g01245 356 PANTHER PROTEIN EXORDIUM-RELATED 1 110 - -
Cca03g01245 356 PANTHER PROTEIN EXORDIUM-RELATED 147 356 - -
Cca03g01245 356 Pfam Phosphate-induced protein 1 conserved region 37 355 IPR006766 -
Cca03g01245 356 PANTHER PROTEIN EXORDIUM-LIKE 5 1 110 IPR006766 -
Cca03g01245 356 PANTHER PROTEIN EXORDIUM-LIKE 5 147 356 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01245 Cca-Chr3 29690713 29691783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01245 - - gmx:100794117 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01245 03 29690713 29691783 Cca03g01245 03 29690713 29691783 ECH