Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01228 ATGGAGAGGATTACTCCGGTGAGGAAGCCACACACTTCTACCGCAGATCTGCTTACTTGGTCTGAAACTCCACCGTCTGATTCCCCAGCGCCTCCTTCCTCCGCCCTTCGTTCTCACCAGCCGTCGGATGGGATCAGGAAGGTGGTATTTGGGGGTCAGGTCACCGATGAAGAGGTCGAGAGCTTAAACAAACGAAAACCTTGTTCAGAGTATAAGATGAAGGAGATAACTGGCAGTGGAATATTTGTAGCCAATGGAGAAGATGACTCCTCAGAAGCTGGCAGTGCTAACCCAAATAAGACTGGAGTACGAATGTACCAGCAAGCGATTGCTGGAATTAGCCATATCTCCTTTGGCGAGGAGGAAAGTCTATCTCCAAAAAAGCCCACTACTTTGCCTGAGGTGGCCAAGCAGCGTGAGCTAAGTGGAACTTTGGAAAGTGAAGACTCTATATTGAAAAAGCAACTTTCTGATGCGAAGTGCAAGGAGCTTACCGGTCATGACATATTTGCTCCACCACCAGAAATCAAACCCAGGCCAATAACTCCTCGCATACTGGAGTTAAAAGGGAGCATAGACATTGGAGAACGACATGTATGCACCACTATAAGTTGCTAA 618 0.4773 MERITPVRKPHTSTADLLTWSETPPSDSPAPPSSALRSHQPSDGIRKVVFGGQVTDEEVESLNKRKPCSEYKMKEITGSGIFVANGEDDSSEAGSANPNKTGVRMYQQAIAGISHISFGEEESLSPKKPTTLPEVAKQRELSGTLESEDSILKKQLSDAKCKELTGHDIFAPPPEIKPRPITPRILELKGSIDIGERHVCTTISC 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01228 205 PANTHER N-LYSINE METHYLTRANSFERASE 1 197 - -
Cca03g01228 205 MobiDBLite consensus disorder prediction 1 44 - -
Cca03g01228 205 PANTHER - 1 197 - -
Cca03g01228 205 Pfam Protein of unknown function (DUF4057) 3 198 IPR025131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01228 Cca-Chr3 29218528 29222025 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01228 - - gmx:100799950 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01228 03 29218528 29222025 Cca03g01228 03 29218528 29222025 ECH