Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01222 ATGAAAGGAAGAGAAGGCAAAGCATCAGCACCCTCTACTGATCTATTAGTATGTTTCCCATCTCGGGCTCATCTTACGCTAATGCCCAAGGCCATTTGCAGCCCAGCCAGGCCCACGGAGCCCAACAAGCGCCACCACCATCGTAAGAAATCCTTCTCCCGAGGAGGCGGAGGCGCCGGCCAAGCCAGCCCTCTTCTATGGGCCAAAACCAAGTCAATGGGCTCCGAAATAACGGAACCGACCTCCCCGAAAGTGACGTGCGCGGGACAAATCAAGGTCCGGCCCAAAAGCGGCACGTGCAGGAGCTGGCAGTCGGTGATGGAAGAGATAGAGAAAATCCACACCGATAAGAAACAGAGGAAGCGTCTCAACTGGGCGGAGACGCTGGGTTTCAAGAAGGAGGTAATGCAGTTCTTGACATGCTTACGAAGCATAAGGTTTGACCTGCGATGCTTCGGCTCCTTCGCCACGgaagaagacgaggacgaggaggaagtggaagtggaagaagaggagaatcatgtggacgaggCATCCAGAACGGTTTTCTCCAAATGGTTCATGGTGTTGCAAGAGGACCAAGGCAACGGCGTCGggagagaggagagagaggagagggaggaggaggagagTGTGCCTCCTCCCAACGCCTTGTTGCTGATGCGGTGTAGGTCTGCTCCGGCCAAAAGTTGGGTgagagaggagagtgaagagagagagatagagaaagtaaaagaaaaagaaaaagaaaaagaaaaagGGGAGGTGGCGGAAAAGAAGGGACAGAGTTTAAAGTCGTTGATGGAGGAAGAGAAGAATGTGGTGGTCATGCGCTACGACTCTGATTTTTACGACATTTCCTCTGATGTTGCAAAAGAGACGTGGATTGTTGGCGGAATCAGAGATCTCATGTCCAGGACTCGAAGTTGTAAAAGATGA 939 0.4377 MKGREGKASAPSTDLLVCFPSRAHLTLMPKAICSPARPTEPNKRHHHRKKSFSRGGGGAGQASPLLWAKTKSMGSEITEPTSPKVTCAGQIKVRPKSGTCRSWQSVMEEIEKIHTDKKQRKRLNWAETLGFKKEVMQFLTCLRSIRFDLRCFGSFATEEDEDEEEVEVEEEENHVDEASRTVFSKWFMVLQEDQGNGVGREEREEREEEESVPPPNALLLMRCRSAPAKSWVREESEEREIEKVKEKEKEKEKGEVAEKKGQSLKSLMEEEKNVVVMRYDSDFYDISSDVAKETWIVGGIRDLMSRTRSCKR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01222 312 MobiDBLite consensus disorder prediction 235 264 - -
Cca03g01222 312 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 312 - -
Cca03g01222 312 Coils Coil 234 254 - -
Cca03g01222 312 MobiDBLite consensus disorder prediction 34 63 - -
Cca03g01222 312 PANTHER OS09G0370000 PROTEIN 1 312 - -
Cca03g01222 312 Coils Coil 161 181 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01222 - - gmx:100814916 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01222 03 29053738 29054900 Cca03g01222 03 29053738 29054900 ECH