Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01197 ATGCTTCATAGTGTTCTAAAATCAAGTAGATTTCTCTATCCACATAGAGAAACCCTTGGTTTGACCAGTACCATTAGTGGTTGTGTCTGTCATTCAGCATTTAGTTCAATGAAAGAAACCAATTCGAAAGTGGATTCTAGGGAACCCTGCATCACAGATTCTTTATCTGTCAGTGGGAACGGTGCCACTTCATCTATGAGTGTAAAATCCACCCCTGAAATTGAAAAGAAGTTCGTACATCACGTTTATAATGCCATTGCTCCACATTTCAGTTCCACCCGGTTCGCAAAGTGGCCGAAGGTTGCAGCATTTTTGTCGTCTTTGCCTTTGGGATCTCTTGTCCTGGATGCGGGGTGTGGGAATGGAAAGTACTTGGGTTTGAATGATGATTGCTTTTTTATAGGATGTGATATAAGTTCTTCCTTGATTAAAATCTGTTCGGATAGAGGACACGAAGTTTTGGTTGCAGATGCTGTGAATCTCCCTTACAGAACTGGTTATGGTGATGCAGCGATATCTATAGCTGTGTTGCATCATTTAAGCACTGAAAATAGAAGGATAAAGGCCATAGAAGAATTGGTCAGAGTTGTTAAAAAGGGTGGCCTTGTTCTGATTACAGTTTGGGCTGTAGAGCAAGAGGATGCAACGCTGATTTCCAAATGGACTCCATTGAATGAGAAGTATGTTGATGAGTGGGTAGGACCAGGAAGTCCTCGTGCTCGGGCCCCCTCATCTGTGTCATTAGAAAGTATTCCAGAAAGTGAGGAGAGCAGATCTGGCGAGCACATGAATGTTTGCAATGAGCCAAATGTATCAAGAGATTTGGAGGAAGAAAAAAATATAAAGAATCAACAAGAATACTTTGTTCCCTGGCATTTACCTTATCATCGTGCTGAAATCAGCGGTGCCTCTGCTGATGCTCTTGCTGCTGGTCTGGCTATTAAAGATGACAAAAAAGGTGCTGTGGTGTATAATCGATATTATCATGTTTTTAGTGAAGGCGAGCTTGAAAGATTGACAACTGGAATAAACAATGCTAGAATTGTTGATCAGTTTTTTGATAAATCCAACTGGGCTAGCTTCAAGCTTCTTTTGTTTGATATCCCCTTTGTGATTATGGGATCAGCAGACAGGGCTGTGCACATTCTCACTTATAACTAA 1161 0.4126 MLHSVLKSSRFLYPHRETLGLTSTISGCVCHSAFSSMKETNSKVDSREPCITDSLSVSGNGATSSMSVKSTPEIEKKFVHHVYNAIAPHFSSTRFAKWPKVAAFLSSLPLGSLVLDAGCGNGKYLGLNDDCFFIGCDISSSLIKICSDRGHEVLVADAVNLPYRTGYGDAAISIAVLHHLSTENRRIKAIEELVRVVKKGGLVLITVWAVEQEDATLISKWTPLNEKYVDEWVGPGSPRARAPSSVSLESIPESEESRSGEHMNVCNEPNVSRDLEEEKNIKNQQEYFVPWHLPYHRAEISGASADALAAGLAIKDDKKGAVVYNRYYHVFSEGELERLTTGINNARIVDQFFDKSNWASFKLLLFDIPFVIMGSADRAVHILTYN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01197 386 Pfam Methyltransferase domain 115 205 IPR013216 GO:0008168
Cca03g01197 386 PANTHER UNCHARACTERIZED 64 361 - -
Cca03g01197 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 228 IPR029063 -
Cca03g01197 386 Gene3D Vaccinia Virus protein VP39 90 362 IPR029063 -
Cca03g01197 386 PANTHER BNAA05G09210D PROTEIN 64 361 - -
Cca03g01197 386 MobiDBLite consensus disorder prediction 236 267 - -
Cca03g01197 386 CDD AdoMet_MTases 114 210 - -
Cca03g01197 386 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01197 K10770 - gmx:100784028 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01197 03 28529430 28531716 Cca03g01197 03 28529430 28531716 ECH