Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g01180 | ATGGACTTAATGGAGTTATGGGCAATTTTCGGCCCCGGCGTCGCTGGCGCTGTCTTCGGCGCCGGATGGTGGATCTGGCTTGACGCCGTTGTCTGCAGCTCCGTTACCGTTCCCTTCCTTCACTACCTTCCTGGAATTTTCGCATCTTTTGCCGCTTTGATGTTCAATTGCGTTAGAAAAGAAGACATCGATTATTCGCCCTATGACGAAGGCGAGTGGAGATTGAAGCTGTGGCTCTTCATTGCATATGTTGTATCCTTCGTTTCTTTAGCTGGATCAGCGGGTTTACTGATCCAAGACTCACTTGATAAATCTGCCCCTTCAGTTTGGGCTGGAGTTGCAGGTGTTTTGCAGTGTGTTTTTGTCTTGATCAGTGGACTGATATATTGGACTTCTCATCCTGAATAA | 408 | 0.4779 | MDLMELWAIFGPGVAGAVFGAGWWIWLDAVVCSSVTVPFLHYLPGIFASFAALMFNCVRKEDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAGSAGLLIQDSLDKSAPSVWAGVAGVLQCVFVLISGLIYWTSHPE | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g01180 | 135 | PANTHER | SMALL MEMBRANE PROTEIN-RELATED | 3 | 134 | IPR007919 | - | |
| Cca03g01180 | 135 | Pfam | Uncharacterised protein family (UPF0220) | 13 | 133 | IPR007919 | - | |
| Cca03g01180 | 135 | PANTHER | OS02G0566900 PROTEIN | 3 | 134 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g01180 | - | - | gmx:100306592 | 270.396 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca03g01180 | 03 | 28281877 | 28284057 | Cca03g01180 | 03 | 28281877 | 28284057 | ECH |