Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01161 ATGGAGAGAATAAACAGTGCTGGTTCTTCGATCAGAAGGCGTTCATTGAGCATATCAAGTCACATAAGCCACCATACAGATAATGATGGCGAGTCCGAGAGTGTTTCAGAGGCCGGAGACATTGGGGATCGTGCTCTTCCAAGCAGAAGGTTCAGTGAGAGCAGCAACTTCAACCTGTCTTTCGACAACAGGTCAGAAAATGAAGCTGTTGTTTCCATTCCAGAGGATTACAGATTGCATCCCAACTCCTCTGTTATGCCTTTGCCTCCTCCACTCATATCCACATCCCCTCTTTCCACTGATGCAATTGTGGGTTCTGAAGACATAAAACAAGATCCCCGTATTGGGTTGCCAGAGTTGTTGGACTACATTTCATGTATGGTTCATTTAGCTGTTTTTGGAATTCTTGGGGTCTTAACAAGATATTTACTGCAAAAGTTATTTGGTCCTGGGGTTGCCCATGTGACAAGCGATGAATCTATTCTTTATGTTGATCTTCCTTCTAATATGATTGGTTCATTTCTTATGGGCTGGTTTGGTGTGGTATTCAAGGGAGACATATCTTATGTGTCAGAGCATCTAGCCATAGCAATAACAACCGGTTACTTAGGAAGCCTTACAACCTTCAGTGGTTGGAATCAAAAAATGCTTGAACTCGGTGTTTCCGGGCATTGGCTCTTTGCCACACTTGGCTTTGCCGTAGGTTTATTTCTCGTTGCCTCTTCCATCACATTTGGGATTGAAACCGCCAAGGGTTTCAGGTGGCTTCTCAACTGGATGAATATGAGTTCAGGAAAAGATGGTTCTAAGATGAACTGCAAAGTAGACAGCTACCGCCGTCAGTTGATAGTTATGGTGATGTTCTTTGTTATATTGGGCATATTATGGGGTGTCAGTGGTGCATTAGTAAAGGATGAGTTCAAGCATGGTGGTAATGCTGCACAGTTATGGTTTGCTTGCATGGTTGGACCCCTAGGTGTGTGGATTAGATGGTTCTTAGCCAGGCTCAATGGACTTGGATTAGGAAGTGGAGGGTTGTTTAAATGGATTCCGTTTGGAACTTTAATTGCTAATGTATCAGCTGCTTGCATTATGGCTGCACTTGCCACTGTGAAGAATGCAGTGAACACCAGGGATTGTGATACAGTGGTAGCAGGAATACAATTTGGTCTGATGGGGTGTCTGAGTACTGTCTCTACTTTCGCTGCTGAGTTTCATGCAATGAGAAAAAGCAATCATCCTTGGAGAGCGTATGCATATGCCATCATTACAGTATTTTTGTCATTCTCTTTGGGAATCTTAATATACTGCATCCCTGTTTGGACAAAGGGGTTTGACATTGACTCGTAG 1350 0.4341 MERINSAGSSIRRRSLSISSHISHHTDNDGESESVSEAGDIGDRALPSRRFSESSNFNLSFDNRSENEAVVSIPEDYRLHPNSSVMPLPPPLISTSPLSTDAIVGSEDIKQDPRIGLPELLDYISCMVHLAVFGILGVLTRYLLQKLFGPGVAHVTSDESILYVDLPSNMIGSFLMGWFGVVFKGDISYVSEHLAIAITTGYLGSLTTFSGWNQKMLELGVSGHWLFATLGFAVGLFLVASSITFGIETAKGFRWLLNWMNMSSGKDGSKMNCKVDSYRRQLIVMVMFFVILGILWGVSGALVKDEFKHGGNAAQLWFACMVGPLGVWIRWFLARLNGLGLGSGGLFKWIPFGTLIANVSAACIMAALATVKNAVNTRDCDTVVAGIQFGLMGCLSTVSTFAAEFHAMRKSNHPWRAYAYAIITVFLSFSLGILIYCIPVWTKGFDIDS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01161 449 Pfam CrcB-like protein, Camphor Resistance (CrcB) 129 239 IPR003691 GO:0016021
Cca03g01161 449 Pfam CrcB-like protein, Camphor Resistance (CrcB) 318 434 IPR003691 GO:0016021
Cca03g01161 449 PANTHER BNAC04G47810D PROTEIN 9 445 - -
Cca03g01161 449 MobiDBLite consensus disorder prediction 20 39 - -
Cca03g01161 449 PANTHER FLUORIDE EXPORT PROTEIN 1-RELATED 9 445 IPR003691 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01161 Cca-Chr3 27863394 27868059 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01161 K06199 - gmx:100815204 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01161 03 27863394 27868059 Cca03g01161 03 27863394 27868059 ECH