Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01160 ATGGAGGAATTGAGGGTGCAACGTGTAGCTTCTGAGTCGAAGGATAGCATTCCTACTGAGTTTGTTAGATTAGAGACAGAGCAACCAGGCAAGACAACTGTTCATGGAACCCAATTGGAGGTTCCTATAATTGATTTTAGTGAGCCTGATGAAGATAAGGTGTTGCATGAGATTATGGAGGCAAGTCGTGACTGGGGCATGTTCCAAATTGTGAACCATGAGATACCAAGCCAAGTTATAGAAAAACTTCAAGCCGTGGGAAAACAGTTCTTTGAGTTGCCACAAGAAGAAAAGGAACAATACGCTAAGCCTGAGAACTCTCCATCTATTGAAGGTTATGGCACAAAGCTTCAAAAGGACGTGAATAACAAGAAAGGTTGGGTAGATCATTTATTCCACAAGATATCGCCACCTTCAGACATTAATTATCGCTTCTGGCCTAAGAACCCTCCTACATACAGAGAGGCAAATGAGGAATATGATAAGTACCTACATGGGGTTATCGACAAGTTGTTCAAAAGCATGTCAATAGGGTTGGGACTTGAAGGACATGAACTAAAGGAGTTTGTTGGAGGTGACAGCATTGTTCATCTTTTGAAGATCAATTACTACCCACCTTGCCCATGCCCTGATCTCGTCCTCGGTGTGCCACCTCATACCGACATGAGTTGTATTACCCTTCTTGTGCCCAACTATGTTCAGGGCCTTCAAGCATCCAGAGATGGTCACTGGTACGATGTTAAGTATATCCCCAATGCTTTGGTCATTCACATTGGGGATCAAATGGAGGTAATGTATCAACTTGTTTCACTTTAA 816 0.4277 MEELRVQRVASESKDSIPTEFVRLETEQPGKTTVHGTQLEVPIIDFSEPDEDKVLHEIMEASRDWGMFQIVNHEIPSQVIEKLQAVGKQFFELPQEEKEQYAKPENSPSIEGYGTKLQKDVNNKKGWVDHLFHKISPPSDINYRFWPKNPPTYREANEEYDKYLHGVIDKLFKSMSIGLGLEGHELKEFVGGDSIVHLLKINYYPPCPCPDLVLGVPPHTDMSCITLLVPNYVQGLQASRDGHWYDVKYIPNALVIHIGDQMEVMYQLVSL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01160 271 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 265 - -
Cca03g01160 271 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 148 IPR026992 -
Cca03g01160 271 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 271 IPR005123 -
Cca03g01160 271 Pfam 2OG-Fe(II) oxygenase superfamily 197 267 IPR044861 -
Cca03g01160 271 Gene3D - 3 267 IPR027443 -
Cca03g01160 271 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 11 265 - -
Cca03g01160 271 SUPERFAMILY Clavaminate synthase-like 4 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01160 Cca-Chr3 27860689 27863417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01160 37 265 Glycosyltransferase AT5G59530 31.120 2.45e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01160 K05278 - gmx:100816829 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01160 03 27860689 27863417 Cca03g01160 03 27860689 27863417 ECH