Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01153 ATGTCTACTGTTTCCACTCAAAACGACGCCGTCACCCACAAAGCGCATCAACCTTTGCAGATTGCGAAGCGCTTAGAGAAGTTTCAGACAACAATCTTCACACAAATGAGCTTGCTTGCCATCAAGCATGGAGCCATAAACCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGTGGCGATTCAGGCAATCAGGGATGGGAGAAATCAGTATGCCCGGGGTTATGGAATTCCAGAACTGAACCTTGCCATTGCTGACAGATTTAAGAAAGATACTGGACTAGTGGTAGACCCTGAAAAGGAAGTTACTGTTACATCTGGATGCACAGAAGCAATTGCTGCAACTATATTAGGATTAATAAATCCTGGTGATGAGGTTATCCTCTTTGCTCCTTTTTATGATTCTTATGAGGCCACTTTGTCCATGGCTGGTGCAAAAGTAAAAGGCGTCACTTTGCGCCCTCCAGATTTTGCTGTTCCTCTTGAAGAGCTGAAGTCTGCTATCTCAAAGAATACCCGTGCCATTCTTATAAATACCCCTCACAACCCTACTGGAAAGATGTTCACTCGAGAGGAGCTCAATGCCATTGCATCTCTTTGCATTGAGAATGATGTTCTAGTTTTCACTGATGAAGTTTATGATAAGTTGGCATTTGATATGGAGCACATTTCCATGGCTTCTTTGCCTGGAATGTACGAAAGGACCGTGACAATGAATTCCTTGGGGAAGACATTCTCCTTGACAGGATGGAAGATTGGTTGGGCCATAGCACCCCCACACTTAACATGGGGAGTGCGACAGGCACACGCTTACCTTACTTTCGCAACCTCCCATCCTTTTCAGTGTGCTGCTGCAGCTGCTCTTAGAGCCCCAGACTCTTACTATGCAGAGCTGAAGAGGGATTATATGGCAAAGAGAGCTATCTTGGTTGAAGGATTGAATGCTGTCGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGATGTTGCATTTTGTGAATATCTTGTTAAAGAAGTGGGAGTGGTGGCAATCCCTACCAGTGTATTTTACTTGAATCCTGAAGAGGGAAAGAATCTAGTCAGATTTACCTTCTGCAAGGATGAGGATACTATTAGGTCTGCTGTTGAGAGGATGAAAGAGAAGCTTAGAAAATGA 1209 0.4417 MSTVSTQNDAVTHKAHQPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPEFVKEVAIQAIRDGRNQYARGYGIPELNLAIADRFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKVKGVTLRPPDFAVPLEELKSAISKNTRAILINTPHNPTGKMFTREELNAIASLCIENDVLVFTDEVYDKLAFDMEHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAYLTFATSHPFQCAAAAALRAPDSYYAELKRDYMAKRAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEDTIRSAVERMKEKLRK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01153 402 Gene3D - 58 296 IPR015421 GO:0003824
Cca03g01153 402 CDD AAT_like 46 398 - -
Cca03g01153 402 Pfam Aminotransferase class I and II 46 395 IPR004839 GO:0009058|GO:0030170
Cca03g01153 402 PANTHER FI04487P 22 402 - -
Cca03g01153 402 Gene3D Aspartate Aminotransferase, domain 1 35 396 IPR015422 GO:0003824
Cca03g01153 402 PANTHER FI04487P 22 402 - -
Cca03g01153 402 SUPERFAMILY PLP-dependent transferases 20 401 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01153 Cca-Chr3 27778734 27780480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01153 K23977 - gmx:100818968 769.229