Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01152 ATGGAACACCAGAAGAGCGGGAGCAAGCTTACCCGAACCCACTCCTCGCTCCTCAGCTGCTCTTCCCCCGCAATCCGATCCTCCATTCACAGCCTCTCTTCCATCATCACTGAAGACCAACACAAACACAAGCTCCTCGATGTGGACGACAAGAAGAGCAAGAAAccccgaccccgactccgggccctggcccaggcccaggcccattcccaggcccaCATGTCCGCCTCCTATTCCACTCTGGCCGTGTTTTTCCTCGGCGCctgctccgtcttgttctacttcttcttcttcCACGTCGAGGTCTCAGCTTCGGAGAATTTGTTGCTAGCCTTGATTTTTGTGGCCGTGGCGCTTTACTTTGCGTCCAAGAACAAGGGGCTTATCCGGCACTCGTTTTCGTTGCTGAGGAATTCGTGGGAGGAGAGTGTGCGGCGGTTGGGGCTCTCGAAGGGGGCGGGGAAGGGGGCGCGGGCGGTGCAGTGGTTCATCGGAGAGGGGGAGGGGCGGAAGGCGAAGATAGTGAGGGAAGGGGTGGAGTTTTACAGCAATGGGGATTTGTACGAGGGGGAGTTTCATAAAGGGAGGAGTAACGGAAGTGGGGTGTACCATTACTTCGTGAATGGGAGGTATGAGGGGGATTGGGTGGATGGCAGATACGACGGTTACGGGATTGAGAGCTGGGCTCGGGGGAGTCGCTACAGGGGTCAGTATAGGCAGGGTTTGAGGCATGGCTATGGGGTTTATAGGTTTTACACGGGGGATTCTTATTCCGGGGAGTGGTGTAATGGCCAGAGCCATGGCTTCGGCCTTCAGACTTGCTCCGATGCTAGCTGTTATATTGGTCAGTTTAAGTATGGCGTCAAACACGGTCTTGGATGTTACCATTTTAGAAATGGAGATAGATATGCTGGAGAGTATTTTGGGGACAAGATACATGGATTTGGGGTCTACCACTTTGCCAACGGCCACTGTTATGAGGGAGCATGGCACGAGGGTCGTAGGCAAGGTATTGGCTCATACACTTTTCGAAATGGGGACCGAAGATGTGGTGAATGGGATGCTGGTAACCTCAAGCAATCTCTACCGCCACTGTCTGATGCGGTTCTTCGAGCAGTTCAGGCTGCTAGGAAAACAGCTGAGAGTGCTATAAACCTTAAACGGGTGGATGACCAGGTTAACAAAGCAGTCATCGCTGCGAGCAAGGCTGCCACTGCTGCTAGAGTTGCTGCAGTGAAAGCTGTTCAGAACAGGATGGACGGGAAATTTTGTGACACTGATGTCTAA 1287 0.4942 MEHQKSGSKLTRTHSSLLSCSSPAIRSSIHSLSSIITEDQHKHKLLDVDDKKSKKPRPRLRALAQAQAHSQAHMSASYSTLAVFFLGACSVLFYFFFFHVEVSASENLLLALIFVAVALYFASKNKGLIRHSFSLLRNSWEESVRRLGLSKGAGKGARAVQWFIGEGEGRKAKIVREGVEFYSNGDLYEGEFHKGRSNGSGVYHYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYSGEWCNGQSHGFGLQTCSDASCYIGQFKYGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGRRQGIGSYTFRNGDRRCGEWDAGNLKQSLPPLSDAVLRAVQAARKTAESAINLKRVDDQVNKAVIAASKAATAARVAAVKAVQNRMDGKFCDTDV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01152 428 Gene3D - 309 367 - -
Cca03g01152 428 Gene3D - 218 262 - -
Cca03g01152 428 Gene3D - 167 217 - -
Cca03g01152 428 Gene3D - 263 308 - -
Cca03g01152 428 SMART morn 324 345 IPR003409 -
Cca03g01152 428 SMART morn 186 207 IPR003409 -
Cca03g01152 428 SMART morn 255 276 IPR003409 -
Cca03g01152 428 SMART morn 278 299 IPR003409 -
Cca03g01152 428 SMART morn 209 230 IPR003409 -
Cca03g01152 428 SMART morn 301 322 IPR003409 -
Cca03g01152 428 SMART morn 232 253 IPR003409 -
Cca03g01152 428 Pfam MORN repeat 234 255 IPR003409 -
Cca03g01152 428 Pfam MORN repeat 326 348 IPR003409 -
Cca03g01152 428 Pfam MORN repeat 257 276 IPR003409 -
Cca03g01152 428 Pfam MORN repeat 280 302 IPR003409 -
Cca03g01152 428 Pfam MORN repeat 211 233 IPR003409 -
Cca03g01152 428 Pfam MORN repeat 188 205 IPR003409 -
Cca03g01152 428 Pfam MORN repeat 303 324 IPR003409 -
Cca03g01152 428 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 17 421 - -
Cca03g01152 428 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 229 356 - -
Cca03g01152 428 PANTHER RADIAL SPOKE HEAD 10 HOMOLOG B-LIKE 17 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01152 Cca-Chr3 27771612 27774836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01152 183 362 Acyl Lipid Metabolism Gene Families AT1G21980 36.111 5.35e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01152 - - gmx:100818442 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01152 03 27771612 27774836 Cca03g01152 03 27771612 27774836 ECH