Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01150 ATGTACAGAGCGTGGAGCGATCAGATTCCATTTTCCCAGTATGAACATCCAATTGTTCTGACTGTTGACGCTCAGGCTCAATATGTTGGACACTTGGGGGGTGGGCTGAGCAAGAATTTGTTTCTCAAGGACAAGAAAAACAGGTTGTATGTTGTTTCTGCTTTAGCTGGTACCAAAGTAGATCTCAAAGCAGTGTTATCTCAGGGGCTTGGTTTGGGAAAAGGTGGCCTGAGAATGACACCTAAGGAGGCTTTAGGTGAAATACTTCAGGTACCGTTGGGTTGTGTCACTCCATTTGCACTACTGAATGAATCAGCAAGAGATGTTTCACTGCTATTGGATCAAGGATTCAAGACTCAGAAGCACTGCTTCTTCCATCCACTGTCGAATGACATGTCCATATCTCTAAATTCATCTGATCTTGACAAATTTCTTAAATCAATAGGAAGAAATCCCTCATATGTTGATTTGGAGGCCAATCCTACAGTGGGGAAGGATCAACCCCCTGATCTAGCTGGACTAGTTCCATCTAGTTCAATAGTTTTGACTGATCAACCCCAAAAGCAAACTTCCTCACAGCCTAAGGGTGCAAACCATGTTTCTGTGGATGATGGAACCAATACAGTTTCAGGTGCTGCCAAAGTTGTCAAGGCATCCTCTGGTGGGAAAAGTACAAAGGGGACACCGAAAACATCACAATTATTGTTTTCAGAGGTCAAGGAAGAAAATATAAAGTTACACGGGGAGCAACTGGGTACCGTGGTATCTGAAAAATTACAAAAAAACCTCAGTTCAGAGTTTAAGAACCTTGCTATGATCTTTAAGAACACAGCATATACAGAAGGGTTCCATGCTGGTACTCGCTGCCAGCCCCCGCGCATGTGA 885 0.435 MYRAWSDQIPFSQYEHPIVLTVDAQAQYVGHLGGGLSKNLFLKDKKNRLYVVSALAGTKVDLKAVLSQGLGLGKGGLRMTPKEALGEILQVPLGCVTPFALLNESARDVSLLLDQGFKTQKHCFFHPLSNDMSISLNSSDLDKFLKSIGRNPSYVDLEANPTVGKDQPPDLAGLVPSSSIVLTDQPQKQTSSQPKGANHVSVDDGTNTVSGAAKVVKASSGGKSTKGTPKTSQLLFSEVKEENIKLHGEQLGTVVSEKLQKNLSSEFKNLAMIFKNTAYTEGFHAGTRCQPPRM 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01150 294 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 8 291 IPR040285 -
Cca03g01150 294 SUPERFAMILY YbaK/ProRS associated domain 8 157 IPR036754 GO:0002161
Cca03g01150 294 Pfam Aminoacyl-tRNA editing domain 16 144 IPR007214 GO:0002161
Cca03g01150 294 MobiDBLite consensus disorder prediction 183 208 - -
Cca03g01150 294 Gene3D - 6 164 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01150 Cca-Chr3 27738297 27746371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01150 - - gmx:100817904 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01150 03 27738297 27746371 Cca03g01150 03 27738297 27746371 ECH