Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01147 ATGGTGGTGGTTGGAAGTGCGGTGGCAGCGTTTGCAGTAGCAAAGCCCTCGCCACTATTCTTGTTAAGAGCACAAAGGGCTTTCAAATTCAGACCCCTCTCTTCCTCTTCCGTACCTTCTAGAAAGCTCGTCTTGTACTCAAAGCCCGGTTGCTGTTTGTGCGATGGCCTCAAAGACAAGCTTCAATCTGCATTCTTACTGTCCGGTCCCGATTCCCTTAACGACGTTCACTTGCAGATAAGGGACATAACCAGCAATCCCGAGTGGGAAAGCGCTTACCAATATGAGATACCAGTGTTGGCTAAAGTCCTTTCCGACGGCACCGAGGTGGCTTTACCACGATTGTCCCCACGTCTAGGAGTGGAGCTCCTCCAGAAAAAGATAGCTGCTGCTCTGAAACAACAATAG 408 0.5 MVVVGSAVAAFAVAKPSPLFLLRAQRAFKFRPLSSSSVPSRKLVLYSKPGCCLCDGLKDKLQSAFLLSGPDSLNDVHLQIRDITSNPEWESAYQYEIPVLAKVLSDGTEVALPRLSPRLGVELLQKKIAAALKQQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01147 135 Pfam Glutaredoxin-like domain (DUF836) 42 128 IPR008554 -
Cca03g01147 135 Gene3D Glutaredoxin 35 124 - -
Cca03g01147 135 SUPERFAMILY Thioredoxin-like 36 126 IPR036249 -
Cca03g01147 135 PANTHER GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG 32 134 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01147 - - gmx:100813076 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01147 03 27713758 27718509 Cca03g01147 03 27713758 27718509 ECH