Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01139 ATGGCGGAAGAGAGCGAGGGGAAGAACATTGAGGCCCAAATCGAAACCGCTATGCGCTCTCGCGTCTCTCACTTCAAGGAACAATCCGACTCTTTGACTTTCGAGGGTGTTCGTCGGTTGCTCGAGAAAGACCTCGGGTTGGAGGAGTACGCTTTGGACGTGCACAAGAGATTTATCAAGCAATGTTTAATCACGTGCTTAGAAGGGGTCGGTGATGATGATGGCCCAAAGATATCAGGGAAGGCAGGGGAAAAAAGTGCTAGTACACAGGAGTCTGAAGGACTGAAAGAAGAATCTGAATCAAAAGATGTGAAGGATTCTCGCCCTGAAGATGAGGAGAAAATGGAAGACTCTCCAGTGTTAGGTCTTCTCAAAGAACAAAAAAGGGTTAAACATGAAACCAAGGATGATAAAGGCAATGGAACCAAAGTAGTTCTGAATGAGGCCCTAATTAAGAAAGCTGTTAGAAAAAGATCTCCATACATCAAGGCTAATGCAGAGAGTGTCACTATGGCTGGTCTTCGTCGACTATTGGAGGAAGATCTTAAACTTGAAAAGTTTACTCTTGATCCCTATAAGAAGTTTATAAGTCAACAGCTTGATGAGGTATTAGCATCTTCTGAAGTTAAGGGACCTTCAAAGAATGCTAAGAAAGTTGTTAAGAAAACACCTGATACCAAAGTAACTAAAAAGGTCAGCAACGAAGAAAACTCTGATAGTTCAGATAAGGAGACTGATGAGGAAGAGAGTCAGGAAGATGAAGTTAAACCTAAAAAAAAGATTGTTCCAAAAGGCAAGATGCAGACTTCTGTCCGACCTAAAAAGCGTAAAGGAGAGGAGACTGATCTATCCAGTAAGAAAAGGGTCAAGCCTACAAAAGCAGCCTCAGAAGACAATAGTGATGCAGAAGATAATGGGAAAAACTCTGAAGATGATCAGTCTGATTCATCACCAGAGAAACCTTCCAAGAAGAAAGAAGTTTCAACTCCTGTGTACGGTAAACGTGTGGAGCACTTAAAGTCTGTTATTAAAGCATGTGGGATGAGTGTTCCTCCTGCAATTTACAAAAAAGTCAAGCAAGTGCCTGAAAACAAACGGGAAGGGCAGCTAATTAAGGAGTTGGAGGAAATACTTTCTAGAGAAGGATTGTCTTCAAATCCATCTGAAAAGGAAATCAAGGAAGTAAAAAGGAAGAAGGCTAGAGCCAAAGAACTTGAGGGTATTGATTTAAGCAATATTGTATCAAGTTCACGTAGAAGGTCAACAACTAGTTTTGCATCTCCTccacctcccaagccgaaggttccagttgaaactagtggcaatgatgctgaaggtgataataatgaaaatgatgatgaagatgacgataatgaagatgatgaagatgaggaagaggatattagtgatgatgatggaagtcagagtgaagaattcaatgatgATGAAGAGGACAGTGATTGA 1464 0.3682 MAEESEGKNIEAQIETAMRSRVSHFKEQSDSLTFEGVRRLLEKDLGLEEYALDVHKRFIKQCLITCLEGVGDDDGPKISGKAGEKSASTQESEGLKEESESKDVKDSRPEDEEKMEDSPVLGLLKEQKRVKHETKDDKGNGTKVVLNEALIKKAVRKRSPYIKANAESVTMAGLRRLLEEDLKLEKFTLDPYKKFISQQLDEVLASSEVKGPSKNAKKVVKKTPDTKVTKKVSNEENSDSSDKETDEEESQEDEVKPKKKIVPKGKMQTSVRPKKRKGEETDLSSKKRVKPTKAASEDNSDAEDNGKNSEDDQSDSSPEKPSKKKEVSTPVYGKRVEHLKSVIKACGMSVPPAIYKKVKQVPENKREGQLIKELEEILSREGLSSNPSEKEIKEVKRKKARAKELEGIDLSNIVSSSRRRSTTSFASPPPPKPKVPVETSGNDAEGDNNENDDEDDDNEDDEDEEEDISDDDGSQSEEFNDDEEDSD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01139 487 MobiDBLite consensus disorder prediction 410 425 - -
Cca03g01139 487 Pfam Histone chaperone domain CHZ 401 432 IPR019098 -
Cca03g01139 487 MobiDBLite consensus disorder prediction 204 335 - -
Cca03g01139 487 MobiDBLite consensus disorder prediction 214 239 - -
Cca03g01139 487 MobiDBLite consensus disorder prediction 445 487 - -
Cca03g01139 487 MobiDBLite consensus disorder prediction 74 140 - -
Cca03g01139 487 MobiDBLite consensus disorder prediction 272 335 - -
Cca03g01139 487 MobiDBLite consensus disorder prediction 90 140 - -
Cca03g01139 487 SMART CHZ_2 399 434 IPR019098 -
Cca03g01139 487 MobiDBLite consensus disorder prediction 379 487 - -
Cca03g01139 487 MobiDBLite consensus disorder prediction 386 406 - -
Cca03g01139 487 PANTHER HIRA-INTERACTING PROTEIN 3 1 486 IPR037647 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01139 10 435 EF-hand Containing Proteins AT1G44780 48.485 2.27e-105 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01139 - - gmx:100784738 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01139 03 27508030 27513668 Cca03g01139 03 27508030 27513668 ECH