Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01138 ATGCCCGCGCTTTATTCCAATTTGCTTCACAATCTCGACCAGTTCGTCGCTAGGGACCAGCAATTAGCGTCGCCTCACACACCGGGAACTGTTCCTTCTTCGCTCCTGTCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCTGGACCCATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGTGCTACTGATGGACCAGAACAGTACGTGGCAATCATGAATGCCATATTCTCTGCACAGCATTCTGTGGTTCCTATAGATTCTTGTTATATTGGTTCGAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACCGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCTACAGTGTTTGCAACTGATTTGCATTCACGTGCATTTTTACGGCTTCCTAAATCCGTGGGTGTGGATTTTCGTGCCTCGTGCTTCTGCCATAAGCAAACAATTGACATGGGCTATGTATGTTCTGTGTGCTTATCCATATTCTGCGAGCATCATGATAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAACTAGATGCCTCAGCAGCCGACCGGAAAAGAAAGGCTTGA 624 0.4679 MPALYSNLLHNLDQFVARDQQLASPHTPGTVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGATDGPEQYVAIMNAIFSAQHSVVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAADRKRKA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01138 207 Pfam Transcription factor Tfb4 28 188 IPR004600 GO:0000439|GO:0006289|GO:0006355
Cca03g01138 207 Gene3D von Willebrand factor, type A domain 2 136 IPR036465 -
Cca03g01138 207 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 4 195 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01138 K03143 - gmx:100810574 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01138 03 27498555 27503842 Cca03g01138 03 27498555 27503842 ECH