Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01134 ATGCTCAGTTCTTCAGCTTCGTTTTTGAGACAGTTAAGTGCAAAGGAGGCTTGGAAATCAACGTCCAACCGGTGGAGTGGGAAAGGGAGTTATATTAGCAGTGACTGGGGAGGGTGTGAGACAAGTTTGAATCAAATGGAAGGGTTTAACATGCatggtaatggggagagtgggattatggggaggaagagggtgatggtggtggttgatggtACTTCACACTCCAAGCATGCAATGATGTGGGCACTCACTCATGTAGCTAATAAGGGTGATTCTTTGACTCTGCTTCTTGTTGTCCCTCCACACAGGGGCTCTGAAACTTCATGCTCCTCTTATCTTGTCAATTATCTTGGGTCCCTTTGCAAAGATTGCAAGCCAGGGGTGGAAGTGGAAGCGCTCGTAATCCAAGGACCAAAACTGGCCACAGTTATGAGCCAAGTAAAGAAGCTGGAGGTCTCTGTCCTGGTACTGGGCCAAAAGAAGCCATCTTCTTTTTTAAGCTGTCTTTGTGGAAGCGGCGGAAGCAGTGATACAGAGGAGTTTGTGGAGCATTGCATCAACAAGGCAGAGTGCTTGACAATTGGAGTGAGGAAGAGAAGCCAGGGCAATGGATACCTTATCAGCACTAGGTGGCAGAAGAACTTCTGGCTTTTAGCTTAG 660 0.4288 MLSSSASFLRQLSAKEAWKSTSNRWSGKGSYISSDWGGCETSLNQMEGFNMHGNGESGIMGRKRVMVVVDGTSHSKHAMMWALTHVANKGDSLTLLLVVPPHRGSETSCSSYLVNYLGSLCKDCKPGVEVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSSFLSCLCGSGGSSDTEEFVEHCINKAECLTIGVRKRSQGNGYLISTRWQKNFWLLA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01134 219 CDD USP_Like 64 191 - -
Cca03g01134 219 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 61 172 - -
Cca03g01134 219 Gene3D HUPs 62 200 IPR014729 -
Cca03g01134 219 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 219 - -
Cca03g01134 219 Pfam Universal stress protein family 62 172 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01134 Cca-Chr3 27445017 27446728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01134 - - gmx:100816511 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01134 03 27445017 27446728 Cca03g01134 03 27445017 27446728 ECH