Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01133 ATGGAGGACACCTTCGTTTTCCAGTGGACCGTTATCAGATCTCTCTTGTCCATCCTTCAGTGGTGGGCCTTCAATGTCACCGTTATCATCGTCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTTTCCTGTGTCCACTTTATCTGTTCAGCCATTGGAGGATATGTGGTAATTAAGGTGCTGAAGCTTAAACCACTGATAACTGTTGACCCTGAAGATCGCTGGAGAAGAATCTTTCCTATGTCATTTGTATTCTGCATTAACATAGTTCTGGGGAATGTGAGCTTAAGATACATTCCAGTTTCTTTTATGCAGACTATAAAGTCATTCACACCTGCCACCACAGTTTTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTAACAGAGCTTAGTTTTAATATGTTTGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACATCTACGAAGACTATTCTTGCAGAATCTCTTTTGCATGGATACAAATTTGACAGCATAAACACAGTCTACTACATGGCACCTTTTGCAACCATGATCTTGGCGCTTCCTGCCATGTTACTTGAAGGCAATGGAATCCTTGAATGGTTAAATACTCATCCGTATCCTTGGTCAGCTCTCATCATCATTTTTAGCTCCGGGGTGTTGGCTTTTTGTCTTAACTTCTCCATTTTTTACGTGATTCACTCCACCACTGCTGTAACATTTAATGTTGCCGGAAATCTTAAGGTTGCAGTCGCTGTCCTTGTTTCTTGGCTGATATTTAGGAATCCAATTTCATATTTAAATTCTGTTGGATGTGCCGTGACTCTTGTGGGATGTACATTCTATGGGTATGTGAGGCACAAACTATCCCAACAGCCACCAGTCCCAGGAACTCCTCGGACACCCAGGACACCCAGGACCCCTCGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAG 1038 0.422 MEDTFVFQWTVIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVFLQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAMLLEGNGILEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHKLSQQPPVPGTPRTPRTPRTPRSKMELLPLVNDKLEDKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01133 345 MobiDBLite consensus disorder prediction 310 332 - -
Cca03g01133 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Cca03g01133 345 PANTHER SOLUTE CARRIER FAMILY 35 4 327 - -
Cca03g01133 345 PANTHER GDP-MANNOSE TRANSPORTER GONST5 4 327 - -
Cca03g01133 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 301 - -
Cca03g01133 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01133 Cca-Chr3 27439713 27444751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01133 8 345 Organic Solute Cotransporters AT1G77610 88.791 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01133 K15285 - gmx:100809511 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01133 03 27439713 27444751 Cca03g01133 03 27439713 27444751 ECH