Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01131 ATGAATAGAAATGGATTCAGAGAAGAAAAGTCATTCTGCTATTTCCACCCCAAACAGCTCCTTATTGGGGTGTGTCCCTTGTGCTTGAACGAGAGGCTCCTCATAGTGGCTGCAAAACAAGGTCGCCACCACCACAACCGTTCTTCTTCCTCCCACAGCCTTCAAACTTCAAAACCATCTTCTTCTATTCACAAGATCTTTGCTTTCGGTTCTCTCTTCACTCGCCATGAATCCCACCACTGCAAATCTCACAACTATGACTATGATGATGTCTCTCCCAGTCCAGAAGAGTCATTCATCTCAATCAAGTTTGAAGAGAATGGGGTGGCATCGTGGGAAAAGAGCACAGTGTCCCTAGAGAAGTGCAACAAGAAGAAGATGTTGTGGAAGCATGAGAAGGACAAGAGCAGGAGCGTGATAGAGCATGGGAAGTCACGTGACTTGCTTAGGTGGCGGAGGAGGATAGGGCACATGTTCCAGCTCATTCGGTGGAAGAAGGGTGGTGGTGTGTGCCACGTGGGCACCAAGGTGAGAAAGGGTTGGATGAGGACTCTGACAAAGAGGAAAACGACCATGGAATAA 582 0.4794 MNRNGFREEKSFCYFHPKQLLIGVCPLCLNERLLIVAAKQGRHHHNRSSSSHSLQTSKPSSSIHKIFAFGSLFTRHESHHCKSHNYDYDDVSPSPEESFISIKFEENGVASWEKSTVSLEKCNKKKMLWKHEKDKSRSVIEHGKSRDLLRWRRRIGHMFQLIRWKKGGGVCHVGTKVRKGWMRTLTKRKTTME 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01131 193 Pfam Protein of unknown function (DUF740) 10 75 IPR008004 -
Cca03g01131 193 PANTHER OS04G0690500 PROTEIN 5 192 - -
Cca03g01131 193 PANTHER OS04G0690500 PROTEIN 5 192 - -
Cca03g01131 193 Coils Coil 187 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01131 Cca-Chr3 27389224 27391177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01131 - - gmx:100305646 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01131 03 27389224 27391177 Cca03g01131 03 27389224 27391177 ECH