Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01118 ATGGGCTGCGCCGCCTCCAAGCTCGACGACTTCCCCGCGGTGGCTCTATGCAGGCAGCGAAAGGACTTGCTCAAAGCCGCATCGGAACAACGCTACGCCCTGGCCGCAGCACACGTGGCGTATTTCCATTCGCTCAACCAAATCGGCGACGCCCTTCGCAAGTTCGCAGACCAGGACCTCAccaccacagcctccacccccacccccacccccGGTTCCTCCTCTCCGGTTCTCACATTACCCTCCCAACCCAAATCTAAACTTTCCTCTTCTTCCCCTTCCATTCACGATTCCCCTCACGGTTCACACTTGCCACTCTCCTCTGGATCCGAATTAAGTTCCCCTTTTCATTCTCATTCCTCTTCCCCAGAACCTCACCCACCACCACCTTCCTTTTCTCCTCCTCCTTATGCCTATTATCAGAATTACCATTACATGAAGAGGACCGTTCCTCATGGCAAACCCATGCTCTACGAAGAGCCGGAGAGACACGTCGCCACGTTTGGACAGTGGCCGGATCCTTCTTACAATGCTTTCTACGGCTTCCAGAATGGGGACTACCCTTATTACcctcctccgcctgctccctcctcttccccgccgccgcctccgccctcgccgccgcGGGTCTCCACCTGGGATTTTCTCAACGTGTTCGAGGCTTTCCACAGCGGCTACCCGGGTTACCCGAACCGGTTCGGGTCGAGTGCGAGCAGTGCCGATTCGAAGGAGGTGAGGGAGAGAGAGGGGATTCCCGAGTTGGAAGACGAAACGGAGCAAGAAACGGCGAAGGAGGTTCAGTTGAAGGAGAATAAGAAGTTGGGGGAGAAAAAGGTGAGGGATTTCGGGGAGGGGCCTTCGAACTCCAAAGCGGTGCCGTTGCAGCAGGTGAGTAGCAGCGAGGGGAGTTCCAAGACGGTGAGGTTTCACGACGGCGGCAGCGACGCCGGTGAGGTGGAGAAAGAGATTAAGAGCAGCCCCGACAGTGTTGTGTCCGAGGAGCCCAAGAAAGGGGTGAGTTTCGAGATTGACGAGGCCACGGTTACGACGGTGGATGGTGACTCTTCCGTTTTGAGTAGTGTCACCACTTTGTCTGCGCATGGCACGAGGGATATCAGAGAGGTTGTTCAGGATATTCGAGATGAGTTTGTCACGGCTTCTGGTTTTGGGAAAGAGGTTGCTTTGTTGCTTGAGGTTTGCAAACCGCCTTATCGCTCCAGGGTTGCGCCACTTAGAGttatgttTTCCAGAATCTTGCAGATGGTAGCACCTTCCAGGTTTCCTTCACATCCCATATCTGTACAATTTTCTTCTAGGGAAATAAAATTGGCGCAAGCATACTGTGGTGAACCTGGGAAAGACTTCAAGACGAATCCAGAGAACCTTTCATCTACACTGGAGAAACTTTATGCATGGGAAAAGAAATTGTATAAGGAAGTTAAGGATGAAGAGAGGTTACGAGCTATTTACGAGAAGCAGTTCAAGAAACTGAGAACATTGGATAATCTAGGAGCTGAATCTAGTAAAATTGATGCTACTAGAGCATCAATTAGAAAGTTGCAAACAAAAATCAATATTTGCATCAGAACTGCTGAAACTATAATGGGAAGGATACACGAATTGAGGGATAAAGAGTTGCAGCCTCAACTTGCAGCACTAGTTAATGGATTCATAAGAATGTGGAAATTCATGCTCAGATGCCACCAGAAACAGTTCAAAGCTATCATGGAGAGTAAAAGTCAGTCTCTTAAGATTAACATTGGCCTGCAAGGAGATGAAGGTTTGAAGGCCATTGTAGAACTTGAAAAGGAGCTTTTGAATTGGTGCTGTCAGTTCAACAATTGGGTTAAGACTCAAAAATCTTATGTCAGAAATTTGAATGAGTGGCTCATAAGGTGCCTTCCTAATGAACCTGAAGAAACAGCTGATGGTATTGCCCCTTTCTCTCCAAGTCGGTTTGATGCTCCACCAGTTTTTATAATTTGCAATGATTGGCATCAAGCAATGACAAGAATTTCAGAAACTGGGGTGGCAGATGCCATGCATGGATTTGCTCTAAAACTACATGAGTTATGGGAAAGGCAAGATGAGGCGCAACGCCAGAGAATCAAAGCGGAGTATCTCACAAAGGACTTCGAGAAACAGCTTAGAACTTTGCGCACAGAAATGGTAGGCTCAGGACAAGAGCATGATAAAGTTTCAGGAAAGACTGCATTGTCAAAGTTTGCTTCTGATGGTGGTGTTTTACCACTAGATGACCTAAAAGTGGATTTAAATTCTATGAAGAAGAGATTGCATGAAGAGAGGGTCAGGCATAAAGAAGCCATCAAACTTGTACGTGATGCAGCTAATAATAGTTTACAAGCTGGTTTGATTCCCATTTTTAAGACATTAGAGAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAACAAGTCAGGCTTCAAAATGTTGGAGACTCGTAG 2463 0.4535 MGCAASKLDDFPAVALCRQRKDLLKAASEQRYALAAAHVAYFHSLNQIGDALRKFADQDLTTTASTPTPTPGSSSPVLTLPSQPKSKLSSSSPSIHDSPHGSHLPLSSGSELSSPFHSHSSSPEPHPPPPSFSPPPYAYYQNYHYMKRTVPHGKPMLYEEPERHVATFGQWPDPSYNAFYGFQNGDYPYYPPPPAPSSSPPPPPPSPPRVSTWDFLNVFEAFHSGYPGYPNRFGSSASSADSKEVREREGIPELEDETEQETAKEVQLKENKKLGEKKVRDFGEGPSNSKAVPLQQVSSSEGSSKTVRFHDGGSDAGEVEKEIKSSPDSVVSEEPKKGVSFEIDEATVTTVDGDSSVLSSVTTLSAHGTRDIREVVQDIRDEFVTASGFGKEVALLLEVCKPPYRSRVAPLRVMFSRILQMVAPSRFPSHPISVQFSSREIKLAQAYCGEPGKDFKTNPENLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQFKKLRTLDNLGAESSKIDATRASIRKLQTKINICIRTAETIMGRIHELRDKELQPQLAALVNGFIRMWKFMLRCHQKQFKAIMESKSQSLKINIGLQGDEGLKAIVELEKELLNWCCQFNNWVKTQKSYVRNLNEWLIRCLPNEPEETADGIAPFSPSRFDAPPVFIICNDWHQAMTRISETGVADAMHGFALKLHELWERQDEAQRQRIKAEYLTKDFEKQLRTLRTEMVGSGQEHDKVSGKTALSKFASDGGVLPLDDLKVDLNSMKKRLHEERVRHKEAIKLVRDAANNSLQAGLIPIFKTLESFTSEVVKAHEQVRLQNVGDS 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01118 820 MobiDBLite consensus disorder prediction 190 209 - -
Cca03g01118 820 Coils Coil 251 271 - -
Cca03g01118 820 PANTHER UNCHARACTERIZED 1 816 - -
Cca03g01118 820 MobiDBLite consensus disorder prediction 261 284 - -
Cca03g01118 820 MobiDBLite consensus disorder prediction 289 307 - -
Cca03g01118 820 Coils Coil 751 771 - -
Cca03g01118 820 MobiDBLite consensus disorder prediction 62 120 - -
Cca03g01118 820 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 816 - -
Cca03g01118 820 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Cca03g01118 820 MobiDBLite consensus disorder prediction 62 133 - -
Cca03g01118 820 MobiDBLite consensus disorder prediction 311 336 - -
Cca03g01118 820 MobiDBLite consensus disorder prediction 230 336 - -
Cca03g01118 820 Pfam Protein of unknown function (DUF632) 373 689 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01118 Cca-Chr3 27073659 27079405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01118 1 702 Acyl Lipid Metabolism Gene Families AT2G27090 27.394 1.13e-55 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01118 - - gmx:100782069 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01118 03 27073659 27079405 Cca03g01118 03 27073659 27079405 ECH