Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01113 ATGGCTTCTTCAATCCCTAGCGCTCCCTCCGCGTTGAATTGCCAGCGCTACGTCGGTCTCAGAGCGCCGCCGAGGAGTTTCAAGTTCACTCTCCCTCAAGCCGCAACCAATTCTCGATCTCCGCGCCTTTTCGTCGTCAGAGCGAGCGATTCGGAGTTCGAAGCCGCCGTTGTCGCCGGGAATGTTCCGCCGGCGCCTCCCGTGCCGCCCAAACCGGCGGCTCCGGTTGGAACACCGGTGGTCCCTTCTCTTCCACTTCACCGGCGTCCACGTCGGAACCGGAAGTCGCCTGCGCTTCGATCGGCTTTTCAGGAAACGAGTATTTCGCCGGCGAATTTTGTGTATCCGCTTTTCATTCACGAAGGTGAAGAGGATACTCCAATCGGGGCTATGCCTGGATGCTACAGGCTTGGGTGGAGGCATGGACTTGTAGAAGAGGTCACAAAAGCACGAGATGTTGGTGTTAATAGTGTCGTGCTCTTCCCCAAAATTCCAGATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGAAAATGGTTTAGTACCTCGGACAATACGTTTGCTCAAGGATAAGTACCCAGATCTTGTTATCTATACAGATGTTGCATTAGATCCTTATTCATCAGATGGGCATGATGGCATAGTTAGAGAAGATGGAGTTATTATGAATGACGAGACTGTTCATCAGCTATGTAAACAAGCTGTAGCCCAGGCCCAAGCTGGAGCAGATGTTGTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCATTGCGGGCAGCTCTTGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCGTATACAGCAAAGTATGCAAGTTCTTTTTATGGTCCATTTAGGGAGGCACTAGACTCAAACCCCCGGTTTGGAGACAAGAAAACTTATCAGATGAACCCAGCTAATTACAGAGAGGCTCTGACTGAGATGCGGGAAGATGAATCTGAGGGAGCTGACATTCTCCTGGTGAAGCCTGGTCTTCCTTATTTGGATATCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCTTACCAGGTTTCTGGTGAGTATGCAATGATAAAAGCTGCTGGTGCCCTTAAAATGATAGATGAAGAAAAAGTTATGATGGAGTCACTGATGTGCCTCCGAAGGGCTGGTGCTGATATCATCCTCACGTATTCTGCTCTGCAAGCTGCCAGATGTTTGTGTGGAGAGAAGAGATGA 1239 0.4939 MASSIPSAPSALNCQRYVGLRAPPRSFKFTLPQAATNSRSPRLFVVRASDSEFEAAVVAGNVPPAPPVPPKPAAPVGTPVVPSLPLHRRPRRNRKSPALRSAFQETSISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVTKARDVGVNSVVLFPKIPDALKSPTGDEAYNENGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQAQAGADVVSPSDMMDGRVGALRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYAMIKAAGALKMIDEEKVMMESLMCLRRAGADIILTYSALQAARCLCGEKR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01113 412 Pfam Delta-aminolevulinic acid dehydratase 88 405 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 PRINTS Delta-aminolevulinic acid dehydratase signature 205 219 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 PRINTS Delta-aminolevulinic acid dehydratase signature 236 255 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 PRINTS Delta-aminolevulinic acid dehydratase signature 274 293 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 PRINTS Delta-aminolevulinic acid dehydratase signature 326 342 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 PRINTS Delta-aminolevulinic acid dehydratase signature 351 366 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 PRINTS Delta-aminolevulinic acid dehydratase signature 381 400 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 MobiDBLite consensus disorder prediction 71 101 - -
Cca03g01113 412 SMART ALAD_2 85 407 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 CDD ALAD_PBGS_aspartate_rich 88 408 - -
Cca03g01113 412 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 2, CHLOROPLASTIC-RELATED 49 411 - -
Cca03g01113 412 Gene3D Aldolase class I 78 412 IPR013785 -
Cca03g01113 412 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 49 411 IPR001731 GO:0004655|GO:0033014|GO:0046872
Cca03g01113 412 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 326 338 IPR030656 -
Cca03g01113 412 SUPERFAMILY Aldolase 83 408 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01113 K01698 - gmx:548095 734.176