Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01090 ATGTTGGCACACACTCTCTGTCTGTGCCACATGGTGTTCCCCGTCGACCGGGTTTCTCCCACCGTTGTGTCTGTGTTCTATGGCAACGCCACAGGCTTGTTCCAGCTGCGGAGGAACACACACCGAGTCGCCGCCCAACTTTCCAAATCTTTTTCCTACAATTTCGGATTGGATTCTCACTCTCAGAGCTTGAATTCCATTCAGTCCCATGCTCCATCAAGGTTGCCATGGACAGGTCCAGTTCCTGGTGACATTGCTGAAGTGGAGGCATATTGTAGGATCTTTAGGAATTCTGAAAGGCTTCATTCTGCGTTAATTGATGCCTTATGTAACCCCCTCACTGGTGAATGCAGTGTTTCCTATGAGGTTCCATCCGATGAGAAACCGCTTCTAGAGGATAAAATTGTTTCTGTCCTTGGATGTATTGTGGCCCTTGTGAACAGTGGGAGGCAGGATGTTCTTTCTGGAAGATCTTCAATTGTGACTCCCTTCCGTTCAGCAGAGGTTGGCGATATGGAGGATATGCTCCCACCGCTTGCCCTTTTCAGGAGCGAGATGAAGAGGTGTTGTGAGAGTTTGCATGTTGCTCTTGAGAACTATTTGATTCCTGGCGATGATAGAAGCTTGGATGTGTGGAGGAAACTTCAGAGACTGAAGAATGTGTGCTATGATTCTGGATTTCCTCGTGAAGAGGATTATCCATGTCCTGTGCTATTTGCGAATTGGAGTCCTGTGTATTTATACACTTCAAAAGAGGACATGGAGTCCAAAGAATCTGAAGCAGCTTTTTGGACTGGCGGGCAGGTAATGGAAGAAGGTCTAAAGTGGTTACTTGATAAAGGATATAAGACTATCATAGATCTCAGAGCAGAGGATGTAAAAGATAACTTCTATCAAGCAGCTCTTCGTGATGCTATTGCATCTGGAAGTATTGAGTTGGTCAAAATCCCTGTTAAAGCTAGCACTGCACCTACAATGGAAGAGGTTGAGAGGTTTGCATCTTATGTTTCAGATTGCAGCAAAAGACCAATCTATCTTCACAGCAAGGAAGGGGTTTGGAGAACATCTGCCATGGTTTCCAGATGGAGGCAGTACATGACTCGCTTTGCATCACAAATGGATTATACAAATGGATTTGGAAAACTGCAGGATTCAAAGATTGCTGAGGAAGCCTCTCTGCAAAAAGATACTAATTTCCTGCAAGAGGGTTTGGGTGCAACACATGGTTCTGTTGGTTCATTTGACTTGTGTACCTCTTCAGAGAAGAATAATGAAAGAATGCAAGGTAATGGGGGCTGGTTTAGTGAGCTTACTCCTAATGACAGGGCTTCGCCGCAAGCCACTTCTGCTAATAAAGAGGGATCTTTTCCAATTTTCTCCAGCAAAACTAGCCCTTTAGATGCTCAAGTTCCTCCTTTTGATATCTTTTCCAAAAAAGAGATGTCCAAATTTTTGGGAACTAGGAATATCTCAAAACCCTCTCATTTCAGTTATCAGGAATGCTTGCCAGATTCAAGGAATCCTGAACCTAAAACTGTGGGTCCTGCAAAAAGTTCCAATGGGTCAGCTCACATGAATTATCCATCTGGAGTGCCCCAGGTCACAGTTGGTAGCAATTGGAAGTTAGTGAATGTGAATACTTCTAGATCTGTTAGCACAACAGTTAATGGGATTAGTGAAGGGGATATGTGTTACAGGACTGATGCCAATGTCTCTGCCACTGTGAACAATGATATTGATAATGCCAATACTAACTCTCAGAGGATTGGAGACGATAAAAATGACTCTGGGTTAGCTTTACATGATGAAGACTTGGGGCTCATCAAAGGAGACATGTGTGCTTCATCAACAGGGGTGGTAAGGGTGCAGTCAAGAAAGAAAGCAGAAATGTTCTTAGTACGAACTGATGGGTTTTCTTGTGCCAGAGAGAGGGTGAGTGAATCCTCTTTGGCCTTTACTCATCCTAGCACCCAACAACAGATGCTTATGTGGAAATCTACACCAAAGACTGTGTTACTTCTGAAAAAGCCGGGGGAGCAGCTCATGGAAGAAGCTAGAGAGGTTGCTTCTTTTCTGTATTTCCAAGAGAAAATGAACGTTTTCGTGGAACCTGATGTGCACGATATATTTGCTAGAATTCCTGGGTTTGGATTTGTTCAGACCTTCTATAGTCAGGATACTTGTGATCTCCATGAGAAAGTTGATCTTGTAGCATGTTTGGGAGGAGATGGTGTTATACTGCATGCTTCAAATCTATTCAGAGGTGCTGTTCCCCCTGTTGTGTCATTTAACCTTGGTTCCCTTGGTTTTCTGACTTCTCATAATTTCGAAGACTATAAGAAGGACTTGCAACAAGTTATCCATGGTAATAATACACGAGATGGAGTGTACATCACTCTTAGAATGCGTCTCCGATGTGAAATTTTTCGTAAGGGTAAAGCTGTACCAGGGAAAGTATTTGATATTCTCAATGAGGTTGTTGTTGATCGGGGATCTAATCCATACCTTTCAAAGATCGAATGTTATGAACATGGTAGACTTATAACCAAGGTACAAGGTGATGGAGTCATTGTGGCCACCCCTACTGGAAGCACTGCCTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCCTGCATGCTGTTTACCCCAATCTGTCCACATTCGCTCTCATTTAGACCAGTTATACTTCCAGATTCTGCTCAACTTGAATTAAAGATTCCAGAGAACGCAAGAAGCAACGCCTGGGTTTCATTTGATGGAAAGAGAAGGCAGCAACTTTCAAGAGGAGATTCGGTTCGAATATCTATGAGTCAGCGCCCGCTTCCAACAGTTAATAAGTTTGACCAAACAGGTGATTGGTTTCATAGCTTGATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAGAAGGCCCTATAA 2931 0.4353 MLAHTLCLCHMVFPVDRVSPTVVSVFYGNATGLFQLRRNTHRVAAQLSKSFSYNFGLDSHSQSLNSIQSHAPSRLPWTGPVPGDIAEVEAYCRIFRNSERLHSALIDALCNPLTGECSVSYEVPSDEKPLLEDKIVSVLGCIVALVNSGRQDVLSGRSSIVTPFRSAEVGDMEDMLPPLALFRSEMKRCCESLHVALENYLIPGDDRSLDVWRKLQRLKNVCYDSGFPREEDYPCPVLFANWSPVYLYTSKEDMESKESEAAFWTGGQVMEEGLKWLLDKGYKTIIDLRAEDVKDNFYQAALRDAIASGSIELVKIPVKASTAPTMEEVERFASYVSDCSKRPIYLHSKEGVWRTSAMVSRWRQYMTRFASQMDYTNGFGKLQDSKIAEEASLQKDTNFLQEGLGATHGSVGSFDLCTSSEKNNERMQGNGGWFSELTPNDRASPQATSANKEGSFPIFSSKTSPLDAQVPPFDIFSKKEMSKFLGTRNISKPSHFSYQECLPDSRNPEPKTVGPAKSSNGSAHMNYPSGVPQVTVGSNWKLVNVNTSRSVSTTVNGISEGDMCYRTDANVSATVNNDIDNANTNSQRIGDDKNDSGLALHDEDLGLIKGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCARERVSESSLAFTHPSTQQQMLMWKSTPKTVLLLKKPGEQLMEEAREVASFLYFQEKMNVFVEPDVHDIFARIPGFGFVQTFYSQDTCDLHEKVDLVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHNFEDYKKDLQQVIHGNNTRDGVYITLRMRLRCEIFRKGKAVPGKVFDILNEVVVDRGSNPYLSKIECYEHGRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPENARSNAWVSFDGKRRQQLSRGDSVRISMSQRPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01090 976 Pfam ATP-NAD kinase N-terminal domain 722 789 IPR002504 GO:0003951|GO:0006741
Cca03g01090 976 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 263 365 IPR029021 -
Cca03g01090 976 MobiDBLite consensus disorder prediction 502 524 - -
Cca03g01090 976 Pfam ATP-NAD kinase C-terminal domain 823 949 - -
Cca03g01090 976 Hamap NAD kinase [nadK]. 669 967 IPR002504 GO:0003951|GO:0006741
Cca03g01090 976 Gene3D - 803 943 IPR017437 GO:0003951|GO:0019674
Cca03g01090 976 PANTHER NAD/NADH KINASE FAMILY PROTEIN 25 976 - -
Cca03g01090 976 Gene3D - 658 968 IPR017438 -
Cca03g01090 976 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 672 971 IPR016064 -
Cca03g01090 976 Gene3D Protein tyrosine phosphatase superfamily 254 380 IPR029021 -
Cca03g01090 976 PANTHER NAD KINASE 25 976 - -
Cca03g01090 976 MobiDBLite consensus disorder prediction 430 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01090 Cca-Chr3 26515566 26526743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01090 K00858 - gmx:100796381 1680.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01090 03 26515566 26526743 Cca03g01090 03 26515566 26526743 ECH