Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01088 ATGGCCATGACTCCCACTACCTCCACCTTCTTCTTCCTCTCATCGCCACCACTCTCTCCCAATCCCTCCTTCCTCCCTTTCAGACTCAAACCACTCTCTAAACCCTCTCTTCTCCTCCTCCGACCCCCCTCAAGGTCTCGCCACAACCCTTTCTTAACCCGCGCCGACGATGACGACGCCGACGCCGCCGGCCCCGACCACTACGAGATGGACGAGGACGAAATGGAGGACCTCGACAACAAGAAGGACTTCGACATCGAGTACGACCCCCTCGTCGCCGCCGCCGCCGCCGACCACGACATCGCCGTCGTCGAGAGCGACACCTTCGTCTCAACGCAGGGCTGGGACTCCGACACCGTCGTCGACTACAAAATCAACGAGGACGAGTTCCACAAGATCACATTGCTCGATTGCGACTTCTTCATCCGCAAGCCCCCCGACCCCGACAACGACGTCTACGATTTCAGAGAGATGTATGTTACTCCTCCGGATACAGATGTTTATTCAATCCCCAAGGTTCTCGCTCCAATGCCGCAGAAGTACATTAGATGCGCGCAGAGTGATTATGGAAGCTACAACGTGACGGAGCCACCTATTGATGCGCCTCGAGATCCTCTATATAAAACTGAGAGGGAGATTCTAAAGGTGTACCTGACAAAACACTACAAAAATCGGAGGATGGGTGATCCTGAGTTTGTGCTAGACTTTGAAGAGATTTATATTATTGATTCCAAAACCAAGTCAATTACCAGAGCCAAAGTTTTGGTAACAGCTCCTGGAGGGAGAACTAGAGATAGAAAGAGCGACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCGAGTGAAAAAGAGGATCCAACGACTGTGATAGAAAAGCAAGAGTGGGAGAACAGCAGACAAGAAATGGAGAGACATCTTAGAAAGCTTAGAGACTTCAGCATCTCAAATTGGTTTTGA 972 0.5062 MAMTPTTSTFFFLSSPPLSPNPSFLPFRLKPLSKPSLLLLRPPSRSRHNPFLTRADDDDADAAGPDHYEMDEDEMEDLDNKKDFDIEYDPLVAAAAADHDIAVVESDTFVSTQGWDSDTVVDYKINEDEFHKITLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDYGSYNVTEPPIDAPRDPLYKTEREILKVYLTKHYKNRRMGDPEFVLDFEEIYIIDSKTKSITRAKVLVTAPGGRTRDRKSDLLVISDRGSSFKIIHASEKEDPTTVIEKQEWENSRQEMERHLRKLRDFSISNWF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01088 323 Coils Coil 297 317 - -
Cca03g01088 323 MobiDBLite consensus disorder prediction 48 67 - -
Cca03g01088 323 PANTHER EXPRESSED PROTEIN 12 323 IPR044710 GO:0000427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01088 - - gmx:100792016 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01088 03 26482017 26486846 Cca03g01088 03 26482017 26486846 ECH