Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01083 ATGGCCACAAGTTGCTCCTACATGGTTTCCACCAAATTACCCATGGTGGGTTGGAGCGGAGGAAGAACAAGGCAAGTCAGAAACCGGAGACCATTTTTGATTTCAGCCCAACAACAAAGCGATGTTGAGGAAGCAGAGAAAGCCAAGGTGGAAGAAGAGCAACAGCAAGAGCAGGGACAAGTTGAGACTCAGAAACCGAAGCCGAAAGGAACCAAACCAAGGCCAGTGGAACCTCAGGTGAATGTGAGGAGCAAAAACATGTTAAGGGAATATGGAGGCCAGTGGTTGAGCTGCGCCACTCGCCATGTCAGGATCTTTGCAGCCTATATCGACCCAGTTACCTGCGAGTTTGATCAAACCCAGATGGATAAGCTCACCCTTATTCTTGATCCTACTGATGAGTTTGTGTGGAATCCTGACACCTGCAACATGGTTTATTCTTACTTCCAGGAGCTTGTCGATCACTACGAGGGTGCTCCATTGACAGAATACACGCTTCGCCTGATTGGTTCGGACATAGAGCACTATATAAGAAGGATGTTGTACGATGGGGTGATCAAGTATAACATGAACGCAAGGGTTCTGAATTTCAGCATGGGCAAGCCTCGGATCATGTTCAACAATGAAATCCAACCTGAAGATGCAATTGAGAAATGA 657 0.4703 MATSCSYMVSTKLPMVGWSGGRTRQVRNRRPFLISAQQQSDVEEAEKAKVEEEQQQEQGQVETQKPKPKGTKPRPVEPQVNVRSKNMLREYGGQWLSCATRHVRIFAAYIDPVTCEFDQTQMDKLTLILDPTDEFVWNPDTCNMVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRRMLYDGVIKYNMNARVLNFSMGKPRIMFNNEIQPEDAIEK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01083 218 MobiDBLite consensus disorder prediction 29 79 - -
Cca03g01083 218 MobiDBLite consensus disorder prediction 42 58 - -
Cca03g01083 218 Coils Coil 33 62 - -
Cca03g01083 218 Pfam Cyanobacterial and plastid NDH-1 subunit M 96 204 IPR018922 GO:0016655
Cca03g01083 218 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 214 IPR018922 GO:0016655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01083 - - gmx:100527195 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01083 03 26403975 26405381 Cca03g01083 03 26403975 26405381 ECH