Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01082 ATGGCTTCCTCTATCGGCGACAACTTCAACCTTCTCTCGCCTCAACAGCAAGAGTTGGTGAAGATGCTGCTGAATAACGGCCAAGAGCACCTGTTTCGCGATTGGCCAGCTTCCGGCGTCGACGACGACCAGAAGAAAGCGTTCTTCGACCAGCTCGTTCGACTTGATTCGTGTTACCCTGGCGGTCTCGAAGCCTACATCAAAAACGCTAAACGGCTCTTGGCTGATTCCAAGGCTGGCAAAAACCCTTTCGATGGCTTCACACCTTCCGTTCCAACGGGTGAGACTATGATATTTGGTGATGAGAACTACATCAATTATGAGGAAGCAGGTGTACGGGAAGCTCGGAAAGCTGCGTTTGTTCTTGTTGCCGGTGGCCTTGGCGAGCGTTTGGGATACAGCGGGATTAAGGTTGCTCTTCCTGCAGAAACCACTACCGGAACATGTTTCATACAGCATTACATTGAATCTATATTGGCACTTCAAGAAGCCAGCTCACAAGGTGAATCCCAGACAGAGATTCCTTTTGTTATTATGACATCTGATGACACCCATGGACGTACTTTAGAGCTATTAGAATCAAATTCTTATTTTGGTATGCAACCCGCACAAGTAACACTTTTAAAGCAGGAAAAAGTTGCATGCTTAGAAGATAACGATGCCAGGCTTGCATTGGAACCACAAAACAAGTACAAAATTCAGACAAAACCTCATGGGCATGGTGATGTGCATTCACTTCTTTATTCAAGCGGCATTCTGAAAAAATGGCATAATGCTGGGTTGAAATGGGTTCTCTTTTTTCAAGATACAAATGGGCTTCTTTTCAAGGCAATTCCATCAGCACTGGGTGTCAGTGCTACGAAACAGTACCATGTTAACTCTCTTGCAGTACCACGGAAAGCAAAAGAAGCTATTGGTGGAATTACCAGACTCACTCACTCTGATGGGAGGTCTATGGTGATAAATGTGGAATACAATCAGCTAGATCCTCTTCTTAGAGCGAGTGGATACCCTGATGGCGATGTAAATAGTGAGACTGGCTACTCCCCATTTCCAGGAAATATTAACCAATTGATTTTAGAACTTGGTGCTTATATTGAAGAACTCTCAAAAACAGGAGGTGCCATTCAGGAGTTCGTTAATCCAAAATATAAAGATGCCACCAAAACTTCATTTAAGTCCTCAACTCGACTTGAATGTATGATGCAAGACTACCCAAAAACATTGCCCCCATCTGCCAGGGTTGGATTCACGGTGATGGAAACATGGCTTGCTTATGCACCTGTGAAGAATAATGCTGAGGAAGCTGCTAAGGTGCCGAAAGGAAATCCATACCATAGTGCAACCTCCGGAGAAATGGCCATCTATCGTGCAAATAGCCTTATTCTCAAAAAGGCTGGTGTCCAAGTAGCAGATCCAGTATTGCAGGTCTTGAATGGGCAAGAGGTTGAAGTTTGGCCTCGTGTCACATGGAAGCCAAAATGGGGTCTGACTTTTTCTCTGATCAAGAGCAAAGTCGGTGGAAATTGCTCCATTTCCGAAAGATCTACTCTGGCCATTAAGGGTCAAAATATTTTTATTGAAAATTTGTCCTTAGATGGGGCTCTAATCATTGATGCTGTGCATGATGCAGAGGTAAACGTGAGTGGTTCAGTTCAAAACAAAGGTTGGATCCTTGAAACTGTTGACTACAAAGATACCTCGGTGCCTGAGGTATTGAGAATCAGGGGTTTTAAATTTAACAAAATTGAGCAGCTAGAAACGAAATACTCTGAGCCTGGCAAATTTCACTTGAAGGCTTGA 1803 0.4398 MASSIGDNFNLLSPQQQELVKMLLNNGQEHLFRDWPASGVDDDQKKAFFDQLVRLDSCYPGGLEAYIKNAKRLLADSKAGKNPFDGFTPSVPTGETMIFGDENYINYEEAGVREARKAAFVLVAGGLGERLGYSGIKVALPAETTTGTCFIQHYIESILALQEASSQGESQTEIPFVIMTSDDTHGRTLELLESNSYFGMQPAQVTLLKQEKVACLEDNDARLALEPQNKYKIQTKPHGHGDVHSLLYSSGILKKWHNAGLKWVLFFQDTNGLLFKAIPSALGVSATKQYHVNSLAVPRKAKEAIGGITRLTHSDGRSMVINVEYNQLDPLLRASGYPDGDVNSETGYSPFPGNINQLILELGAYIEELSKTGGAIQEFVNPKYKDATKTSFKSSTRLECMMQDYPKTLPPSARVGFTVMETWLAYAPVKNNAEEAAKVPKGNPYHSATSGEMAIYRANSLILKKAGVQVADPVLQVLNGQEVEVWPRVTWKPKWGLTFSLIKSKVGGNCSISERSTLAIKGQNIFIENLSLDGALIIDAVHDAEVNVSGSVQNKGWILETVDYKDTSVPEVLRIRGFKFNKIEQLETKYSEPGKFHLKA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01082 600 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 13 467 IPR029044 -
Cca03g01082 600 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 6 577 IPR039741 -
Cca03g01082 600 Pfam UTP--glucose-1-phosphate uridylyltransferase 108 265 IPR002618 GO:0070569
Cca03g01082 600 Gene3D - 468 588 - -
Cca03g01082 600 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 540 IPR029044 -
Cca03g01082 600 PANTHER UDP-SUGAR PYROPHOSPHORYLASE 6 577 - -
Cca03g01082 600 CDD UGGPase 118 432 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01082 K12447 - gmx:778158 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01082 03 26382989 26391098 Cca03g01082 03 26382989 26391098 ECH