Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01066 ATGGCATGTCATTGTGCTTACAATGCCTTTTCATTTTCACCAATAAGAGAATTCTTCACCTCCAACCACGTCATGTCAAAGCCATCCACTAGATGCAGACCCTTTATCTTGTCCATCACTAATGCCACACCATCCTACAACACCCTTGTTTCTGAGGCTGTTAGGCTCTTGGTTCCTTCAGCAAGATTTGAAGCTTCAAAACTGAAGGTTGTTCTATTGGAAGATCAGATAAACAAACATGCAAGTATTATTCCAAGAACCTACATTCTATCCCATTGTGACTTTACAGCAAATCTAACTTTAGCTGTCTCCAATGTGATCAACCTAGAGCAGTTGAGAGGGTGGTACCAGAAGGATGATGTTGTAGCTGAATGGAAGAAAGTGCAAAATGATATGTGCCTACATGTTCATTGCTTTGTTAGTGGTCCCAATTCCTTCCTCGATCTGGCTGCTGAATTGAGATATCACATATTCTCCAAGGAAATGCCTTTGGTACTGAAAGCAATTCATTGTGGAGATTCTGCACTTTTCCGTGAGCATCCTGAGTTGCTGGATTCTACAGTTAGAGTATATTTTCATTCTAGCTCACCAAAATATAACAGAATGGAATGTTGGGGACCTCTCAAGGATGCAATGGAGGGAAAACAACAGGATCAGTTCCAAGGGTCAATAAGCAGAGATTGTCCTGAAAAGTGGCGTAGCCCAAAGTCCATCTTCCAAGCTCTTTTTGCTTTTCTTCTTTGA 744 0.4126 MACHCAYNAFSFSPIREFFTSNHVMSKPSTRCRPFILSITNATPSYNTLVSEAVRLLVPSARFEASKLKVVLLEDQINKHASIIPRTYILSHCDFTANLTLAVSNVINLEQLRGWYQKDDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMPLVLKAIHCGDSALFREHPELLDSTVRVYFHSSSPKYNRMECWGPLKDAMEGKQQDQFQGSISRDCPEKWRSPKSIFQALFAFLL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01066 247 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 1 247 - -
Cca03g01066 247 Pfam Staygreen protein 62 211 IPR024438 -
Cca03g01066 247 PANTHER PROTEIN STAY-GREEN LIKE, CHLOROPLASTIC 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01066 Cca-Chr3 25872557 25876568 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01066 K22013 - gmx:100795181 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01066 03 25872557 25876568 Cca03g01066 03 25872557 25876568 ECH