Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01053 ATGTCTCAGGGAAGAGGCAGTGCATCTTTACCTAGGCTTGTGGTCACTGTGGTTTCACTACTGTGCGTGTTAGTTCTAGTGGAACATGCCAATGCAGCAATTTACTCCGTTGGAGGATCTGGCGGATGGACCTTCAACACTAACACTTGGCCCAATGGAAAAAGATTCAGAGCTGGCGATGTGCTAGTGTTCAACTATGACTCAACGGCACACAATGTGGTTGCTGTGGACAGAAATGGATACAACAGCTGCAAGACACCATCAGGTGCTAAAGTGTTCCGTACAGGGAATGACCAAATAAAACTAGCAAGAGGGCAGAACTACTTCATATGCAACTACCCTGGTCACTGCGAATCTGGGATGAAGGTTTCCATTAATGCAGCATGA 387 0.4677 MSQGRGSASLPRLVVTVVSLLCVLVLVEHANAAIYSVGGSGGWTFNTNTWPNGKRFRAGDVLVFNYDSTAHNVVAVDRNGYNSCKTPSGAKVFRTGNDQIKLARGQNYFICNYPGHCESGMKVSINAA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01053 128 SUPERFAMILY Cupredoxins 33 127 IPR008972 -
Cca03g01053 128 PANTHER BLUE COPPER PROTEIN 9 126 IPR039391 GO:0009055
Cca03g01053 128 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
Cca03g01053 128 Gene3D - 33 127 IPR008972 -
Cca03g01053 128 ProSiteProfiles Phytocyanin domain profile. 33 128 IPR003245 GO:0009055
Cca03g01053 128 CDD Plantacyanin 33 127 IPR041844 -
Cca03g01053 128 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Cca03g01053 128 PANTHER BASIC BLUE-LIKE PROTEIN 9 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01053 Cca-Chr3 25585448 25586579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01053 15 126 Miscellaneous Gene Families AT5G26330 38.462 4.55e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01053 - - gmx:100788635 218.779