Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01043 ATGACACTGCTTAATTGTCTCCTTTCAGCTTGGTATGGTCTGCCTTTTGTGTCTCCCCACAACATATTAGTGTCAACAGTTAATGGCACAGGTGCTTTGATTGAAATCATATACGTGTTGATCTTCATCACATTGGCACCAAGGAAAGAAAAGGCTAAAATTCTTGGTCTCTTCACCTTTGTGCTCTCGGTGTTCTCTGCTGTTGTTTTCGTGTCACTTTTTGCCCTGCATGCCAATGCCAGAAAACTCTTTTGTGGCTTCGCTCCTGCCATATTTTCCATAATCATGTATGGCTCGCCACTCTCAATTATGAGACTAGTGATCAAAACCAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCACTGTTTGTGTTTCTCTGCGGCACTTCCTGGTTTATCTTTGGCCTGCTAGGCCGTGACCCATTTGTAGCAGTACCTAATGGCGTTGGTTCTGCTTTGGGGACAATGCAACTAATATTGTATTTCATATACCGAGAAAAGAAAGGTGTTGCAAAAAGGCAAGCCCAAACAGAGGAAGAATCCATGGAGATGGGTGACACAAAACCCCAACAAGAGAAGCAATCCAATGCAAATGGAACTCAAACATGA 609 0.4335 MTLLNCLLSAWYGLPFVSPHNILVSTVNGTGALIEIIYVLIFITLAPRKEKAKILGLFTFVLSVFSAVVFVSLFALHANARKLFCGFAPAIFSIIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFVAVPNGVGSALGTMQLILYFIYREKKGVAKRQAQTEEESMEMGDTKPQQEKQSNANGTQT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01043 202 MobiDBLite consensus disorder prediction 174 202 - -
Cca03g01043 202 PANTHER RAG1-ACTIVATING PROTEIN 1 1 200 - -
Cca03g01043 202 Pfam Sugar efflux transporter for intercellular exchange 86 168 IPR004316 GO:0016021
Cca03g01043 202 Gene3D - 81 179 - -
Cca03g01043 202 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 1 200 IPR018180 GO:0051119
Cca03g01043 202 MobiDBLite consensus disorder prediction 188 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01043 Cca-Chr3 25403371 25407475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01043 1 145 Miscellaneous Gene Families AT1G21460 77.241 2.19e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01043 K15382 - gmx:100800304 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01043 03 25403371 25407475 Cca03g01043 03 25403371 25407475 ECH