Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01041 ATGGCAACAGCCTTGTCCACGACCAGTGTGCTTCGCTGGAGGAATCCACAGCACATGCATATCTCACCCTCTTCACAGACACTTTGCCACTCCTCACTCCAAAATGGAACTTTAAGAACTGTAGCTGCTTCAGCCTCAAAAGACATCAACAGAGAAAGTGAGAAGGGTTCTTCTTTGTTGGTGAACAGAAGAACAGTCTTGGCTTCTGGGGTTTCCTTGTTGGGCTTCCCGGGTGAGAGTTTGGCCGTGGTGAAACAAGGCCTTCTAGCAGGGAGAATTCCTGGTCTGTCTGAACCAGATGAACAAGGCTGGAGGACATATCGCAGGCCAGATGAAAAGTCAGGAGGACATGGGGTTGGATGGAGTCCTATTATCCCATACAGCTTCAGAGTGCCTGAAGAATGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGCACAGAGATAGATTTGAGATTTGCCAGCTCTAAGGAAGGACGTTTGTTTGTCATTGTTGCCCCTGTTCTTAGATTCTCTGATAATCTTGGTGACAATGCTACAATAGAAAAAATTGGACCTCCAGAGAAAGTGATCAATGCTTTTGGTCCGGAAATGATTGGGGAAAATGTGGAAGGGAAGGTTCTAAGTTCTAATGTAGCAGAACATGAAGGAAGAACATATTATCAGTTTGAGCTAGAGCCTCCTCATATTTTCATTACTGCCACTGCAGCCGGCAATCGCTTATATTTGTTTGGTGTAACAGGCAGTGGTCTTCAGTGGAAGAGACACTACGATGATTTGAAGAAGATAGCTGAGTCTTTTCGGGTCGTATAA 816 0.4547 MATALSTTSVLRWRNPQHMHISPSSQTLCHSSLQNGTLRTVAASASKDINRESEKGSSLLVNRRTVLASGVSLLGFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDNLGDNATIEKIGPPEKVINAFGPEMIGENVEGKVLSSNVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSGLQWKRHYDDLKKIAESFRVV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01041 271 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 124 271 - -
Cca03g01041 271 PANTHER - 19 271 - -
Cca03g01041 271 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 19 271 - -
Cca03g01041 271 SUPERFAMILY Mog1p/PsbP-like 119 270 IPR016123 -
Cca03g01041 271 Pfam PsbP 127 270 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01041 - - gmx:100785447 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01041 03 25385884 25387786 Cca03g01041 03 25385884 25387786 ECH