Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01039 ATGGATATATGGAATAGTTGGTGGGTTTTGCAAATTATGCAGTTGCTGGGTTTGTTCAGTTTTTGGATCTCATTTGCCAAGTTTAGAACTTTATTCTCAAGAGCTTTTGGTTATGGTCACAAAGTTGTTAAGGGTGACTACAGTACCTGGATCTTTGGTTCCTTCAATGGGTTGGTCACAGTTGGTTCTTTCATATTCTTCCTTTTGGTCCTTTCCTGGGCTTATTTATATGCATTTCCCAGTTCTCCCTCAGTGGTTCAGAGTTATAGTGAGATTCCCAACAGTTCTCACTCACTTGCTCAGAGTTATGAGATTCCCAACAGCTCTCAGTCTTTTGTTCAGAGTTATGATGAGATTCTAAAATCCAATGTTTCAAAGAACACATGCAATGTGTTTGAAGGAAGTTGGATAAGGGATGATATCTACCCTTTGTATGATGCTTCTCACTGCCCTTTTGCTGAGAGGGGTTTTAATTGCCTTGCTAATGGGAGAAAAGATAGGGGTTACACAAAATGGAGGTGGAAACCCAAGAACTGTGATATTCCAAGGTTTGATGCCCGTAGAATACTTGAACAACTTCGTGGGAAAAGGGTGGTTTTTGTTGGGGACTCGTTGAGTAGGACGCAATGGGAGTCCATGATATGTTTGCTAATGACAGGAGTTGAGAATAAGAAGAGTGTGTATGAAATCAAAGGCAACAAGATCACGAAACAGATAAGGTTCTTAGGTGTGAGGTTTAGTTCTTTTGATGTTAGAATCGATTTTTATCGATCAGTATTCCTGATGCGGCCTGGTTCCGTGCCTAAACATGCATCCCAAAGGGTGAAGACAACACTGAGATTGGACAAGATGGATGATATTAGCCATGAATGGATTGATTCTGATATTCTTATATTCAATTCAGGTCACTGGTGGACAAGGACCAAGCTTTTTGACATACAGGGGCTGGTATTTTCAGGTTGGTAA 966 0.4058 MDIWNSWWVLQIMQLLGLFSFWISFAKFRTLFSRAFGYGHKVVKGDYSTWIFGSFNGLVTVGSFIFFLLVLSWAYLYAFPSSPSVVQSYSEIPNSSHSLAQSYEIPNSSQSFVQSYDEILKSNVSKNTCNVFEGSWIRDDIYPLYDASHCPFAERGFNCLANGRKDRGYTKWRWKPKNCDIPRFDARRILEQLRGKRVVFVGDSLSRTQWESMICLLMTGVENKKSVYEIKGNKITKQIRFLGVRFSSFDVRIDFYRSVFLMRPGSVPKHASQRVKTTLRLDKMDDISHEWIDSDILIFNSGHWWTRTKLFDIQGLVFSGW 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01039 321 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 181 317 IPR026057 GO:0016740
Cca03g01039 321 Pfam PMR5 N terminal Domain 128 180 IPR025846 -
Cca03g01039 321 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 47 313 - -
Cca03g01039 321 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 47 313 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01039 Cca-Chr3 25348682 25351837 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01039 - - pvu:PHAVU_009G134800g 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01039 03 25348682 25351837 Cca03g01039 03 25348682 25351837 ECH