Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01036 ATGGATTTGATTAAGGTTTGGAGATTGAGCCCCTGCGTAAGTGTAATTCCCTCACCACCACTTATCACTATCACTCCGAGTAGAATTCGCTTCTTCTCTGCCTCTGCAACAAATTTCTCCTTTCAGTTTTCTACATCTCCCTGCACTCCCATTCCACGTGGCAGAAGGAGAGACTCTGATTCAGAGCCCGTTCTAGAACCCTCCATTGTCCAAGAGCTATCATTCGACGACGAAGAAGAAGACTTCCTCGACGAATTTCAGTACGaggatgaagacgacggcgacgagtactacgacgGAGAAGAGGAGGCTGGTGTGCCTTATGCAGGTGATGGCGGCGCAGGTGGTGGAATCTCCCTCGCCGGGACATGGTGGGATAAAAAAGCACTAGCCATTGCTAAAGAGGTTACTCTCTCTTTTGATGGCGAATTGCAAATTTATGCTTTTAAAACATTGGTCAACGCCACCATTCAAGTGCGCATTGAGAACCTTTCTAAAAAGTCTGGTTCCCCCAGCATGGAAGATATTGAAGCATTCTCTGCAACATACAGAGCAAAATTGGATGAAGCAGAACTTGCCAAATTTGTTCCCGACAATATATGTTTGGAGGTGTCATCTCCTGGTGTTGAAAGAATAGTTCGGATTCCAGATGACCTAGATCGATTCAAGGACCGACCTATGTATGTGAAATATGTCATTAATGATGATTCAAATAATCCAGCTGCAGAAAGTGATGGTGTCTTCAGGCTTGAATCTTTTGACATGGAAACGAAATATTGCAGCTGGGGTTTAGCAGATGTGAAAGTCAACAGACAGAAAGCAGGGAAAGGAAGACCACTGAATAAAAAACAAAGAGAGTGGCGTTTAAGCACTCCATTTGATTCCTTACGTTTTGTACGGTTGCACTCTGATATTTAA 918 0.4216 MDLIKVWRLSPCVSVIPSPPLITITPSRIRFFSASATNFSFQFSTSPCTPIPRGRRRDSDSEPVLEPSIVQELSFDDEEEDFLDEFQYEDEDDGDEYYDGEEEAGVPYAGDGGAGGGISLAGTWWDKKALAIAKEVTLSFDGELQIYAFKTLVNATIQVRIENLSKKSGSPSMEDIEAFSATYRAKLDEAELAKFVPDNICLEVSSPGVERIVRIPDDLDRFKDRPMYVKYVINDDSNNPAAESDGVFRLESFDMETKYCSWGLADVKVNRQKAGKGRPLNKKQREWRLSTPFDSLRFVRLHSDI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01036 305 SUPERFAMILY YhbC-like, N-terminal domain 154 210 IPR035956 -
Cca03g01036 305 PANTHER OSJNBA0006B20.18 PROTEIN 45 305 - -
Cca03g01036 305 Pfam RimP N-terminal domain 151 210 IPR028989 -
Cca03g01036 305 PANTHER OSJNBA0006B20.18 PROTEIN 45 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01036 Cca-Chr3 25303767 25308193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01036 - - gmx:100783320 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01036 03 25303767 25308193 Cca03g01036 03 25303767 25308193 ECH