Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01031 ATGGCATCTGCATCAAATGTGAGGGAGGACAAATACCGCCCCTATTTGCGGGAAGACAGTGAGAAGAACATGAAATGGAGATATGGTGGCCCCCCTAATTATGATGTTGTGAACAAACTATTTGAAGAAGGCAGAACCAAGgtatgGCCTCCGGGTTCAGTTGAAGATGAGGTGCAGACTCTAGTCAAGAATTGGGAGATGGAGATGTTCCACAAAGTGGATATGCATGATTACAGATCAGTGGATCCAAACAAATACACTTTCAGCCTAAACGGTAGGAAGGGTATTAGTTTGAAAGAGAAAAGGAAGCTTGGTGGAGGGTATATCCCTCTCTTGCAAACCTCGCTGCCAGAGAAACTGAGGCCTTACAATCCATATGAAGAAACAGCAGATTCATCTCACAAGGCTTTCACAACAACGTTCCCACGTGGCTTTGCTCTGGAGATTGTGCACGTGTATTCTGGACCTCCAGTGATTGTCTACAAGTTCAGACACTGGGGCTACATGGAGGGTCCCTTCAAAGGCCACGCCCCTACTGGGGAAAAAATTCAAGTCTTTGGGATGGCCATTTTCACTTTGGATGAGAATTCAAAAATTGTGAAGGTGGAGTTCTTTTATGATCCTGCTGAACTACTAGGAGGTCTCCTGAAAGGTGCTGAATTTGATGGCAGTGCTGAAGATGCAGTTACAAGCTGTCCTGTACTCAGGAACACAGGCTAG 720 0.4542 MASASNVREDKYRPYLREDSEKNMKWRYGGPPNYDVVNKLFEEGRTKVWPPGSVEDEVQTLVKNWEMEMFHKVDMHDYRSVDPNKYTFSLNGRKGISLKEKRKLGGGYIPLLQTSLPEKLRPYNPYEETADSSHKAFTTTFPRGFALEIVHVYSGPPVIVYKFRHWGYMEGPFKGHAPTGEKIQVFGMAIFTLDENSKIVKVEFFYDPAELLGGLLKGAEFDGSAEDAVTSCPVLRNTG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01031 239 PANTHER PATHOGEN-RELATED PROTEIN-LIKE 3 239 - -
Cca03g01031 239 Gene3D - 119 216 - -
Cca03g01031 239 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 3 239 - -
Cca03g01031 239 SUPERFAMILY NTF2-like 133 212 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01031 Cca-Chr3 25189523 25193090 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01031 - - gmx:100805630 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01031 03 25189523 25193090 Cca03g01031 03 25189523 25193090 ECH