Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01020 atgacattgagattgagaCTCAAAGTGTCTTCAATTGGGTCACCTTTTCTGCAGTTAGGTTCTTCTGCAACTCGCTTCTCACTCTCACAAGCATGCTCTGTTTCCAAACTGGCTTTTCATCCTCTACGCTTGCAACGCAACACAAATTCATCCCCAACAAGGCTCCTTGTTCGGGCTGCAAGAATTGAGTCCAAAGGTGTTACCTTGGGCTTCAGGGCCCCACAATTTCAGCTTCCGGAGCCACTTACTGGAAAGCTTTGGACATTGGAAGATTTTGAATCATATCCAGCTTTACTGGTTATGTTTATATGCAACCACTGTCCATTCGTTAAGCACCTTCAAAAAGACATTGTAAAGCTTACAAAGTTCTATATGAAGAAAGGACTTGCTGTCATTGCTATATCTTCAAATTCTGTAGCCACGCACCCCCAGGATGGTCCAGAATTCATGGCAGAAGATGCTAAATTGTTTGACTATCCTTTCCCATACCTATATGATGAGTCACAGAATGTTGCGCGGGATTTTGGAGCTGTTTGTACTCCAGAGTTTTACCTTTTCAAAAAGGATGGTCGAAGGCCATTTGAGCTTGTTTATCATGGTCAGTTTGATGATTCACGGCCAAGAAATAATGTACCAGTCACTGGAAGAGACTTGAGCTTGGCAATAGATCGTGTTCTTAGTGGCCAAGAGGTACCATCAGAGCAAAAAGCTAGGTACTTTGTACATATTCTTCTCCTTTAA 741 0.417 MTLRLRLKVSSIGSPFLQLGSSATRFSLSQACSVSKLAFHPLRLQRNTNSSPTRLLVRAARIESKGVTLGFRAPQFQLPEPLTGKLWTLEDFESYPALLVMFICNHCPFVKHLQKDIVKLTKFYMKKGLAVIAISSNSVATHPQDGPEFMAEDAKLFDYPFPYLYDESQNVARDFGAVCTPEFYLFKKDGRRPFELVYHGQFDDSRPRNNVPVTGRDLSLAIDRVLSGQEVPSEQKARYFVHILLL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01020 246 Gene3D Glutaredoxin 54 243 - -
Cca03g01020 246 CDD PRX_like1 70 236 - -
Cca03g01020 246 PANTHER OS07G0260300 PROTEIN 22 239 - -
Cca03g01020 246 Pfam AhpC/TSA family 70 190 IPR000866 GO:0016209|GO:0016491
Cca03g01020 246 ProSiteProfiles Thioredoxin domain profile. 67 227 IPR013766 -
Cca03g01020 246 SUPERFAMILY Thioredoxin-like 66 239 IPR036249 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01020 - - gmx:100780633 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01020 03 24995945 24999441 Cca03g01020 03 24995945 24999441 ECH