Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01018 ATGGCATCACTACCCCAAATGTGTAGCACATTAGGATCTTTCATGAGCTGCAACAAGATTATCCACACACCACCATGCATTACCCAATTACACAACAACAAAACTACTCATTTCAGAAACTTAGTTTGCAAAGAAACATGCTTTCCATCATCATTAGTAGCTCAGAAGAAGGGCATAAATTTATGGAAGCAATGCCAAAATGAAAAATGGAAAACACGGGTTGGGGAAACTCCTGAGTTCGCTGTACATGTCCAACATTTCTACGAAGCCTTCAATGAAAGAGACATTCAAAAATTGAAGCAATTAGTCTCCGATGAATGTGTGTACCAGGACCTCCTCTTCTACACTCCCTTCAAAGCCCAGGATGTCATAAACTTATGGCAGAAATTGATGGAAGCAATGGGTCCAAATATTAAAATTGCAGTAGATAGCGTTACTGAGGACAATCTCATGGTTACTGTGTTTTGGCACTTGGAGTGGAACGGAAAGAAAATACCCTTCACAAATGGATGCAGATTCTTTTGGTTTGAAGAAGTTGAAGGAAGATTAATTATCAGCAAGATAACCGGCATGGAGGAACTTCCACTAAAACCTGGTGAACTAGTACTCAATGTGTTAAAAGCAATTAGTACTCTCCTCGACACCTACCCACAAATGGCTTCAGCGTTGCTTGACACTCATGCCTTACAAGATGGTATCAAACGCGGAGGAAGTCCATGA 720 0.4069 MASLPQMCSTLGSFMSCNKIIHTPPCITQLHNNKTTHFRNLVCKETCFPSSLVAQKKGINLWKQCQNEKWKTRVGETPEFAVHVQHFYEAFNERDIQKLKQLVSDECVYQDLLFYTPFKAQDVINLWQKLMEAMGPNIKIAVDSVTEDNLMVTVFWHLEWNGKKIPFTNGCRFFWFEEVEGRLIISKITGMEELPLKPGELVLNVLKAISTLLDTYPQMASALLDTHALQDGIKRGGSP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01018 239 Pfam SnoaL-like domain 84 178 IPR037401 -
Cca03g01018 239 PANTHER NTF2-LIKE DOMAIN-CONTAINING PROTEIN-RELATED 3 226 - -
Cca03g01018 239 Gene3D - 56 188 - -
Cca03g01018 239 PANTHER NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN 3 226 - -
Cca03g01018 239 SUPERFAMILY NTF2-like 83 181 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01018 Cca-Chr3 24940929 24944209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01018 - - ccaj:109806319 335.88