Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01012 ATGTCAGCCCTTATATTCTCCAGCTTAAGCTACAACCAATTAACTATGCTTAACGCTTCTTCTCCACTCTTCAGCCTCAACATGGATCAATTCCCACACATTATTCCCACAGAAAGATCACCCAGAAGAGAACTACAACTCCAAGGTCCACGCCCCACACCGCTTAGGATAAACAAAGACTCTCACAAGATCAAGAAACCACCGTTGCCGCCGCAAGCCTCACACCCTCAACCTCCACCGCGCCAACCCATCATAATCTACACCGTTTCACCCAAAGTCATTCACACCACACCCGGTGACTTCATGAACCTCGTTCAACGCCTCACTGGctcctcctcctcctcctcttcatcctcatccAACTTGGAAGCGAATAATAATGACCCTTTCAACGCCGGAGGAGTGGTGTCTCCGGCGGCGCGTTACGCCACCATCGAGAAGGCCATGTCCCCGATGGGGAAGAAGCAGCTTGTGAATATCCCAAGTGGGGGTGCTAATAGCAATAGTAACATAATAAGCGATGAGATTATGGGTCATGCGGTTGTGGAAAGATCACAAAACATGTTTCAAGGGATTTTGTCTCCGGGTCCGGCTTCACTATCTCCCATTCCTTCGAATTTTTTCTCTCCACCGTCTTCGGATCCGAGCATGGTTAGCTTCCTTCACGATTTGAGTCCTGTGCTTCATAGTGGAAGAAATCTCACGGAGGGTGCGTTCGTCTTGCCAAGCCCTTCTTCCAACTTTAGCTTTGTGTCGCCGCACACTCCTTCTATAGACTTATTCAACTATTTCTTAGACTAG 801 0.4657 MSALIFSSLSYNQLTMLNASSPLFSLNMDQFPHIIPTERSPRRELQLQGPRPTPLRINKDSHKIKKPPLPPQASHPQPPPRQPIIIYTVSPKVIHTTPGDFMNLVQRLTGSSSSSSSSSSNLEANNNDPFNAGGVVSPAARYATIEKAMSPMGKKQLVNIPSGGANSNSNIISDEIMGHAVVERSQNMFQGILSPGPASLSPIPSNFFSPPSSDPSMVSFLHDLSPVLHSGRNLTEGAFVLPSPSSNFSFVSPHTPSIDLFNYFLD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01012 266 PANTHER F16F4.1 PROTEIN-RELATED 32 264 IPR039607 -
Cca03g01012 266 MobiDBLite consensus disorder prediction 37 83 - -
Cca03g01012 266 MobiDBLite consensus disorder prediction 108 131 - -
Cca03g01012 266 MobiDBLite consensus disorder prediction 69 83 - -
Cca03g01012 266 Pfam VQ motif 88 114 IPR008889 -
Cca03g01012 266 PANTHER F16F4.1 PROTEIN 32 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01012 Cca-Chr3 24855719 24856932 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01012 K20725 - gmx:100813603 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01012 03 24855719 24856932 Cca03g01012 03 24855719 24856932 ECH