Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01010 ATGGACTACGATTTCCGAAGCCGGTCGGGCCCACAAGCTCCGATGTACCGTCCTCCACCGTCGCCGATGTACCGCCCGTCGCCGTATCAGCAGAATCCTTCTCCTCCTTCTTCAGGATTTGGCGTTAGGGTTGCTATAAAGCCAGAATATCGGATCACACCGCCGCCTCATTTATCATCACATGCTGGAGATAATCCACGGAGCAACTTCCAATTTGATTTTGAATTGGAGAGAAAAATTTTGGCTGAAGCACAGAAGGATAACCCAAATTGGAGCAAATTTGGATCAGAATATATGCCAACTAAAAGTTCTGATACATCAACGTCAAAGGTTTGTTCTTGA 342 0.4649 MDYDFRSRSGPQAPMYRPPPSPMYRPSPYQQNPSPPSSGFGVRVAIKPEYRITPPPHLSSHAGDNPRSNFQFDFELERKILAEAQKDNPNWSKFGSEYMPTKSSDTSTSKVCS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01010 113 MobiDBLite consensus disorder prediction 87 113 - -
Cca03g01010 113 MobiDBLite consensus disorder prediction 1 70 - -
Cca03g01010 113 PANTHER LD44032P 20 108 IPR038870 GO:0000813|GO:0043130|GO:0043162
Cca03g01010 113 PANTHER BNAA03G12290D PROTEIN 20 108 - -
Cca03g01010 113 MobiDBLite consensus disorder prediction 13 33 - -
Cca03g01010 113 MobiDBLite consensus disorder prediction 89 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01010 Cca-Chr3 24832957 24836705 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01010 - - gmx:100500107 167.162