Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00830 ATGCTGTCCTCAGACTCCGGTTCAGTGCTCCGACCCAAGCCCCCCATACCCACCCGCCACCCGGCCCGGTCACTCTTCTCCCCTGCCTGCTTCCGCCCGGGATCCAGACCCGCCGGGCCCAGACTCCCCCTCAAAATGGAACTCCTCCGCCGAATGGGCCGCGGCTGCTTCAGGGCGGAGGCCCACGCCGCCGGCCAGGACGTGTTcgacgccgccgccgccgccACGCCCAAGACGGCTCCTCATCACCTTGTTATAATGGTTAACGGAATCGTTGGGAGTGCTGCTGATTGGAGATATGCTGCAGAACAGTTTGTGAAAAGGCTTCCAGACAAAGTGATTGTACACCGCAGTGAATGCAATTCTTCAAAATTGACGTTTGATGGTGTTGATACAATGGGCGAGAGACTAGCTGAAGAGGTATTATCTGTTGTTAGACGTTGGCCAGAGGTGCAGAAGATATCATTTGTGGCGCATTCTCTAGGTGGCTTGGTTGCAAGATATGCTATTGGGAGACTTTATGATTATTCTTCAACATTGGCACTTATTGGTTCTGGTAGAAACTGTTTCAGTGAAGAGACTGAATATTCAAAGCAATGCCTTGAACAGAGTTATGAAGCCAAAATTGCTGGTTTAGAGCCCATGAACTTTATAACATTTGCAACACCACATCTTGGTTCAAGAGGAAATAAACAGCTTCCATTTCTATGCGGCCTTCCTTTTCTTGAGCGAAGAGCATCCGAAACTGCACATTTAGTTGCAGGGAGATCTGGGAAGCATCTCTTCCTTATGGACAATGATGATGGAAAGCGTCCTCTGCTCCTGCGAATGGTTAATGACTCTGACGACTTAAAGTTTATGTCAGCTTTACGTGCATTTAAGCGTCGAGTGGCTTATGCAAATGCTAATTATGATCATATGGTAGGATGGCGTACCTCATCAATTCGTCGTCAACATGAACTTCCAAAGTCCAATCTTCTTGTAATTGATGAGAGATACCCACACATTGTTTATGTTGAAGGAGAGACTGCTGATGACATTCACAATAAAACATCTTCTAATATTGGAGGACAAATAATCGACTTAGAAGAGGAGATGATAAGGGGGCTCACTCGGGTATCTTGGGAGCGTGTGGATGTTAGCTTTCGGAAAAGTAAACAGCGCTACATTGCTCACAGTACAATTCAGGTGAAAACATATTGGTTGAATTCTGATGGTGCTGATGTGGTTTACCATATGATAGATAACTTTCTTCTTTAG 1260 0.4548 MLSSDSGSVLRPKPPIPTRHPARSLFSPACFRPGSRPAGPRLPLKMELLRRMGRGCFRAEAHAAGQDVFDAAAAATPKTAPHHLVIMVNGIVGSAADWRYAAEQFVKRLPDKVIVHRSECNSSKLTFDGVDTMGERLAEEVLSVVRRWPEVQKISFVAHSLGGLVARYAIGRLYDYSSTLALIGSGRNCFSEETEYSKQCLEQSYEAKIAGLEPMNFITFATPHLGSRGNKQLPFLCGLPFLERRASETAHLVAGRSGKHLFLMDNDDGKRPLLLRMVNDSDDLKFMSALRAFKRRVAYANANYDHMVGWRTSSIRRQHELPKSNLLVIDERYPHIVYVEGETADDIHNKTSSNIGGQIIDLEEEMIRGLTRVSWERVDVSFRKSKQRYIAHSTIQVKTYWLNSDGADVVYHMIDNFLL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00830 419 MobiDBLite consensus disorder prediction 1 22 - -
Cca03g00830 419 SUPERFAMILY alpha/beta-Hydrolases 79 340 IPR029058 -
Cca03g00830 419 Gene3D alpha/beta hydrolase 82 262 IPR029058 -
Cca03g00830 419 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 65 419 - -
Cca03g00830 419 Pfam Putative serine esterase (DUF676) 81 312 IPR007751 -
Cca03g00830 419 PANTHER UNCHARACTERIZED 65 419 IPR044294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00830 Cca-Chr3 19283189 19304711 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00830 - - gmx:100792868 739.954