Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00826 ATGGAATCCGAGAAGAATTTGCTGCTTCCACTCTCTGATAATCACAAACAGAGTGAAGAGGGACAAAGAAAAGTTTCAACCATGACAAGAAAAGGAGTCATCGCTGCTTTATCTTATATGGCCTCTTCGGTTCTATTGGTCTTGTTCAACAAAGCAGCCCTCTCCTCTTACAGCTTCCCACATGCAAATGTCATGACACTTGCCCAGATGGTGTTTGCATTTATTATTCTCTATGTGTTGAAATCCTTGAAGATAATTTCTTTCACAACTGGTGAATCGCAGAGCAGTTCTAAGAATTCAGCAATATTTGTGCCCTTTGGGACATTAGTCCAGACACTTCCTCTTGCTTTAACTTATTTGCTTTTCATGGTAGTGACCATGGAAGCAGTGCGTGGCATAAACATTCCCATGTACACCACACTTAGGCGAACAGTAGTGGCCTTCACAATGGTTATGGAGTATTTTCTGTCGGGGCAGAGTCATTCAAGATGTGTTGTTGGAAGTGTTGGAGTAATCATAGCTGGTGCTTTTGTTGCTGGAGCTCGTGACTTGTCATTTGATGCGTATGCCTATTTTGTTGTATTTATAGAAAACATGTGTAAGGCAGTGTACCTTGCTTCTGTTTCTCGTGTTGGTAAATCCAGTGGCCTTAATATTTTTGGTATTGTATGGTGCAATGTGGTGATTTGTGCACCAATCTTGTTTCTCTGGTCATTACTCAGAGGAGACCTCCAAGCAACACTGAACTTCCCATACTTGTTCTACACTGGATTTCAGGTTGTGCTGCTTCTTTCCTGTGCTTTTACTTTCTTTCTAAACTACATCGTAGTTTTGAATACAACCATCAACTCGGCACTTACACAGGCAATCTGTGGTAATTTAAAGGATGTTTTAACAAGTGGTCTTGGTTGGTTATTATTCGGAGGACTTCCATTTGATTTGTTCAATATTCTTGGACAAATACTTGGCTTCATTGGGTCCTGTTTGTATGCCTATTGTAAACTCCAAGGAATATGA 1017 0.4051 MESEKNLLLPLSDNHKQSEEGQRKVSTMTRKGVIAALSYMASSVLLVLFNKAALSSYSFPHANVMTLAQMVFAFIILYVLKSLKIISFTTGESQSSSKNSAIFVPFGTLVQTLPLALTYLLFMVVTMEAVRGINIPMYTTLRRTVVAFTMVMEYFLSGQSHSRCVVGSVGVIIAGAFVAGARDLSFDAYAYFVVFIENMCKAVYLASVSRVGKSSGLNIFGIVWCNVVICAPILFLWSLLRGDLQATLNFPYLFYTGFQVVLLLSCAFTFFLNYIVVLNTTINSALTQAICGNLKDVLTSGLGWLLFGGLPFDLFNILGQILGFIGSCLYAYCKLQGI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00826 338 MobiDBLite consensus disorder prediction 1 24 - -
Cca03g00826 338 PANTHER UDP-SUGAR TRANSPORTER-LIKE PROTEIN 4 338 - -
Cca03g00826 338 Pfam Triose-phosphate Transporter family 36 330 IPR004853 -
Cca03g00826 338 PANTHER SOLUTE CARRIER FAMILY 35 4 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00826 Cca-Chr3 19078377 19084643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00826 9 226 Organic Solute Cotransporters AT2G13650 23.451 3.61e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00826 K15281 - gmx:100794308 554.673