Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00798 atgtctctttcattaaacatccctcatgtggtgctccaatggagctccaagcaacacaacaacatgcctgtgattggacttggcacagcttcatctccctctcctaatgatacaaaagtggcagtgttggaggctataaaacttggttacaggcacattgatactgcttcagtgtatggctcagagcagcctcttggagaagctatagctgaagcacttcaacttggcctcatagcctctagagatgaactcttcattacttccaagctctggtgcactgataattttcctcatcttgttgttcctgcactcaataaaacacttcaGTCTTTGAAGTTGGAATATTTGGATCTTTATTTGGTTCACTGGCCCATTGCTGTAAAACCTGGAAATTGGGAGTTTCCTTATCCTGAAGAGGCTCTAGCCTCATTTGACTTAGAAGGTGTGTGGAAACAAATGGAGGAATGCCAAAAGCTTGGCCTTACAAAATGTATTGGAGTTAGCAACTTCAGTCGTAAAAAACTAGAAAATCTTCTCTCTTTTGCTACTATTCCTCCTTCTGTTAATCAAGTTGAGATGAATCCTACTTGGCACCAAAAAAAGTTGAGAGAATACTGCAAAAATAAAGGTATAATCATAACTGCATACAGTCCTTTGGGAGCAGCTGGGACCTTTTGGGGTTCCAATGATGTTTTGGAGAATGAATTGCTCAAGGAAATTGCTGAGGCTCATGGCAAATCTGTTGCTCAGGTATCTCTTAGATGGTTGTATGAGTTAGGGATAACTATTGCAGTGAAGAGTTACAACAAGGAGAGAATGAAGCAAAATTTAGAAATATTTAATTGGTCACTTACAAAAGATGACTATGAAAAGATTGATCAAGTCAAGCAACATAAGTTGATGAGCAATGGACCAGCAAAATTCGTTCCCGATCTTTGGGATGAAGAAAATTAA 954 0.2484 MSLSLNIPHVVLQWSSKQHNNMPVIGLGTASSPSPNDTKVAVLEAIKLGYRHIDTASVYGSEQPLGEAIAEALQLGLIASRDELFITSKLWCTDNFPHLVVPALNKTLQSLKLEYLDLYLVHWPIAVKPGNWEFPYPEEALASFDLEGVWKQMEECQKLGLTKCIGVSNFSRKKLENLLSFATIPPSVNQVEMNPTWHQKKLREYCKNKGIIITAYSPLGAAGTFWGSNDVLENELLKEIAEAHGKSVAQVSLRWLYELGITIAVKSYNKERMKQNLEIFNWSLTKDDYEKIDQVKQHKLMSNGPAKFVPDLWDEEN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00798 317 Gene3D - 6 315 IPR036812 -
Cca03g00798 317 PANTHER ALDO/KETO REDUCTASE 15 315 - -
Cca03g00798 317 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 15 315 - -
Cca03g00798 317 CDD AKR_AKR4A_4B 22 297 IPR044497 GO:0016616
Cca03g00798 317 PRINTS Aldo-keto reductase signature 45 69 IPR020471 GO:0016491
Cca03g00798 317 PRINTS Aldo-keto reductase signature 106 124 IPR020471 GO:0016491
Cca03g00798 317 PRINTS Aldo-keto reductase signature 153 170 IPR020471 GO:0016491
Cca03g00798 317 PRINTS Aldo-keto reductase signature 187 216 IPR020471 GO:0016491
Cca03g00798 317 PRINTS Aldo-keto reductase signature 231 255 IPR020471 GO:0016491
Cca03g00798 317 ProSitePatterns Aldo/keto reductase family signature 2. 153 170 IPR018170 GO:0016491
Cca03g00798 317 ProSitePatterns Aldo/keto reductase family signature 1. 49 66 IPR018170 GO:0016491
Cca03g00798 317 SUPERFAMILY NAD(P)-linked oxidoreductase 19 297 IPR036812 -
Cca03g00798 317 PIRSF AKR 10 310 IPR020471 GO:0016491
Cca03g00798 317 Pfam Aldo/keto reductase family 25 295 IPR023210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00798 Cca-Chr3 17744350 17747564 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00798 - - gmx:100788544 532.717