Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00740 ATGCTCCTTTGTTGTTCTGTTGCTTACAAGAATTTCATAGAGGAATCTTCTATAGTCTATACATACAATCGTGTAGCTGAAATAGAAAAACATTGTACCCCATATTTTACTTCACCATCTAAATCAGTTCCTGATGATAATAGAGGTTACACACTTTATAGTGAACTCTCTTTCACTAATGGAGATTGGAATCAGGAGAATGGGGGTTTCCCTTTGATTCCATTCGATGATAGTGACATGCAATGGCATAGGTTGCCTTATAGAGCTGATCCTTTGCAACTTGTTTCCTTCCAAGTTCAGGACATCAATGTAGTCCATCACTTAGAAAATGCTTCAGTTAACGTTGGAGGGATATTATCCATAGGAGTATCTAGAAATACTACATTTTTCCCATCGCTTCACTCTCCATCTTTCACCATGATGCCTGGTTTCTCCATCCTCACTATTGTCTTTGAAGGGGTCTATTTTGAAAGCGAAGATCGTTTGTTGTGTCTGTTGGGGAATGCAGCTTTGCCCATATCTGATCCCCATGTTGAATATTGGGACATAACTAATAGTCATTGGTCTGGTTTTAGTCACCAGCCACGGCTTTTGCAAGATGATCAAATTTTGCTTGTTCTGAGGTACCCTCAAACATTCAATTTGACAAGCAGGGCTATAAAGGGTGAAATTAGAAGCTTAAACAAACATGGAAGTTTGAAGTACTTTGATAATGTTCATATTTCTTCTCAGCTGAGTCGGTATTCCACGTATCATTTTAGTCCTGAATTAATGCCAAGACCTTGTGATGATAAACACTTTTGCCAAGGGGAATGGGCATTAAATGATGCACTCACATTCAGTGGCTCTGAGTTTTGCAAGACTCTCCGAAGCATTTCAGAACCTTTCAATGTGATCCCAAATTATTTGTTGAATAACAGTTATGCTTACCAAAGCAAACTAGGACCTCTCCAACCTGGAAAGGAATTTGGCTTAGCTAACTGGAGATTGAACCATGAAGATTTCAAGCTTATATTGCAACATGTAATATGTGAGGAGGAAACTAACAATCATAATATGAAAAATGCAAGAATTTCAGCAACACTAAGACTGTTCCCTGCATCTATACCGGAAGAAACAGCAAGAGAAAGAACAGGCCTCTCCAACCTTACTTTGTTAGCTGAGGGGATATGGTATTCCTCAAGTGGGAAACTATGCATGATTGGATGTTCTGGTGAAGTTAATTCAACGTTGGAAGAATGTAAGTATCAGATATCCTTGTACTTTCCACTAGTGTACTCCATCAAGCAGAGAAGTCTCATGCTGGGGAGTATATCCAGCATTGCAAATGAAACAAACATGTTTTTCCCTTTCCTGATTAATTATGCACCACGTCCTGTGCTTCTCCATTTGAGTCTTGGTCCATGCGGTTCTTCTTGCTTATTATATAATTACTCAATGATTACGCTAGCAACTTCAATTAGAGAGAGAAATCAGCCATCAAAATTCAGACTTCTCAAGCAATCATCATTCTTGAAGTATCCAGCTTTGAAAGATGAACAAGATGTACTTGGTCAGCTAAGTTTTCTATCCTCAAATCTCAATTTTGATGCATATGCAATTTGCAAGCATTGCTTGGACAAACATAACTCAAGGGTCTTTATCCATATGGATGTGTTTTCTTTAGGTCCAGTATTTGGACCACATGTACCAGCAGGAACTGAAAAACTAACAAATACCCAACTTCTCAATATCTCTTCGCATCTTATATTCAATGAAGGATCTTCAGTATTTACAAATCAGCAATATAGGCATCTGTCACCTTTATTCTTGGAAGGTGTATATGATCCACTAGCTGGTGAAATGTATCTAATTGGTTGCAGAATGGTTTCAAATATGAGCACCAATGTTGGGCATGGCCTAGATTGTCTCGTGGATGTTAAGGTTCAGTACCCTCCTTTAATTGGACGATGGCTGAAAAATCCTTCAGTTGAAATAACCATTACTAGCCAAAGGCATGAAAATGATCCTCTTCATTTTAATGCTGTCACTCTTCAGACAGACATTGTTCCCTATTTGAATCATCAAGATGATGTGGCGTTCAGAAAACTCTTTGAAAGAGTTCTTAGGATACTACTCTCCTGTGCTCTCGTTGGAATCATTTGTAGCCAACTCAGTTACATGAAAAGAAATGTAACTTCCATTCCTCACATATCTCTTGTCATGGTTGCTGAACAAATTCTTGGTTATGTAGCTGAGTTGTTGAGGGGTACAGAGATCCTTCTTGAATCAAAGGAATCTGCGTCTTACAAGGATTTATCTCATGATTATAAACTTATATTAAATCCCCTAGAAATCATAACAAGGCTTCTTGTGTTGGTTTCCTTGCTTCTTACTATAAGGCTCTACAAGAAGGTGTTAGAAGCTAAGAGAAGGTCAAACGCTTATGGGTCTGATAAGGAAAAGCGTTTGCCCCAAAATAAGAATGTTCTGTTATGGAATTTGAAGGTTCACATTGTTGTGTGCCTGGTGCTAACAGCTGTACTAGCAATCGAGCTATCTCTCAAAAATAATTTAAGGTCCCTAGGCTTAATAGATGTTCTTCTTCTGCCTGGCATCTTCATTCAACAAGTGCATATGCATGTCCTTTGGGCTCAAGATTTTTTTCTGATTCCTCAGGCTCTTCAGAAGTCTGTGTGGCAAAGCAAAGTTAAGCCGCTGAGGAAAATGTACTATGTTGGACTCACGTTGCTAAGGCTAATTCTCTATTCCTATGACTACATCAGAGACCCTATTTTAGAACCATACTCTGATAATGAATGTCCTCTCTATCAATACTCTCACCTGCAAAATTCACTTTGTCCTCAAGGTGAAGGACATAAGAGATTTCACTCCACTTCACCCTGGACAAAGACCAAGCCATTGCACCAAAACCAAACATTGAGGAGGATCGGTGGAAATGGTCCCACTTGGACTGCAAAATGGCTAGTGGTTGCAGAAGTGGATGATTATCATGAGCAAAAGGTGGAATGGCATCCCACTTGTGACCCCTACGATGGTGATATAAGAGCTTATGGTTCGTACAGTTTGATGAGTTGA 3078 0.3912 MLLCCSVAYKNFIEESSIVYTYNRVAEIEKHCTPYFTSPSKSVPDDNRGYTLYSELSFTNGDWNQENGGFPLIPFDDSDMQWHRLPYRADPLQLVSFQVQDINVVHHLENASVNVGGILSIGVSRNTTFFPSLHSPSFTMMPGFSILTIVFEGVYFESEDRLLCLLGNAALPISDPHVEYWDITNSHWSGFSHQPRLLQDDQILLVLRYPQTFNLTSRAIKGEIRSLNKHGSLKYFDNVHISSQLSRYSTYHFSPELMPRPCDDKHFCQGEWALNDALTFSGSEFCKTLRSISEPFNVIPNYLLNNSYAYQSKLGPLQPGKEFGLANWRLNHEDFKLILQHVICEEETNNHNMKNARISATLRLFPASIPEETARERTGLSNLTLLAEGIWYSSSGKLCMIGCSGEVNSTLEECKYQISLYFPLVYSIKQRSLMLGSISSIANETNMFFPFLINYAPRPVLLHLSLGPCGSSCLLYNYSMITLATSIRERNQPSKFRLLKQSSFLKYPALKDEQDVLGQLSFLSSNLNFDAYAICKHCLDKHNSRVFIHMDVFSLGPVFGPHVPAGTEKLTNTQLLNISSHLIFNEGSSVFTNQQYRHLSPLFLEGVYDPLAGEMYLIGCRMVSNMSTNVGHGLDCLVDVKVQYPPLIGRWLKNPSVEITITSQRHENDPLHFNAVTLQTDIVPYLNHQDDVAFRKLFERVLRILLSCALVGIICSQLSYMKRNVTSIPHISLVMVAEQILGYVAELLRGTEILLESKESASYKDLSHDYKLILNPLEIITRLLVLVSLLLTIRLYKKVLEAKRRSNAYGSDKEKRLPQNKNVLLWNLKVHIVVCLVLTAVLAIELSLKNNLRSLGLIDVLLLPGIFIQQVHMHVLWAQDFFLIPQALQKSVWQSKVKPLRKMYYVGLTLLRLILYSYDYIRDPILEPYSDNECPLYQYSHLQNSLCPQGEGHKRFHSTSPWTKTKPLHQNQTLRRIGGNGPTWTAKWLVVAEVDDYHEQKVEWHPTCDPYDGDIRAYGSYSLMS 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00740 1025 Pfam Protein of unknown function (DUF2921) 30 932 IPR021319 -
Cca03g00740 1025 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 1 932 IPR021319 -
Cca03g00740 1025 PANTHER - 1 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00740 Cca-Chr3 15195911 15199544 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00740 - - gmx:102659944 1464.9