Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00734 ATGGTTGCAACGGCCGCAACGGCGTCGTTTACCCCTGTGCCGTCGCCGGACACGGGGAGAGGAAAGCCAACGAAATTCGGGTCCGTGAGCGTGGGAGGGCTGAAACCGAAGCAAGGTAACGGTCGCTTGCAGGTGAAGGCACAGGCGCAGGCAGCACCCAAGGCTAAGGGAGCGGTGGTGGAGGACGAATTGGCATCTTCGGCGTCGCTTTCTCATGCTCCGAGGACTTTCATCAACCAGTTGCCGGACTGGAGCATGCTCCTCGCCGCCATCACCACCGTCTTCCTCGCCGCGGAGAAGCAGTGGATGATGCTCGACTGGAAGCCGCGGCGCCCGGACATGCTCGTTGACCCCTTTGGGATCGGAAAGATCGTGCAGGATGGGCTTGTGTTCAGGCAGAACTTCTCGATTAGGTCCTATGAGATTGGCGCGGACAAAACCGCGTCTATAGATACCATAATGAATCATTTGCAGGAGACTGCACTTAATCATGTGAAGACTGCGGGGCTTCTGGGTGATGGTTTTGGTTCAACGCCAGAAATGTGCAAGAAGAACCTCATATGGGTGGTGACCAGGATGCAGGTTGTGGTTGATAAGTATCCTACATGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCATCAGGAAAGAATGGTATGCGTCGGGATTGGCTTGTGCGTGACATCAAAACTGGTGAAGTCTATGCAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAACATACAAGGAGACTTTCTAAAATTCCAGAAGAAGTCAGAGGAGAGATAAGCTGTTATTTTGTAGATTCTGCTCCAGTTGTGGAAGAGGATAACAGAAAACTACCCAAACTTGATGATACAGCTAATTTTATTCGTACTGGTTTAAGTCCCAGATGGAATGATCTGGATGTTAATCAGCATGTTAACAATGTGAAGTACGTTGGGTGGATTCTGGAGAGTGCACCACAGCCACTATTGGAGAGTCATGAGCTGTGTGCCATGACTTTGGAGTACAGAAGGGAGTGTGGCAGGGACAGTGCCATGACTTTGGAGTACAGAAGGGAGTGTGGCAGGAACAGTGTGCTGGATTCTCTGACTGATGTGTCTGGTGCTGATACAGGCAATATAGGAGACGGTGGACTTTTTGAGTGCAAGCACTTGCTTCGACTTGAAGATGGTGCTGAGATTGTAAGGGGTAGGACTGGATGGAGGCCCAAACCAGGAAACAACCTTGGTGTTTTCAGTCAGGTTACAGCAGAAAACATCTGA 1272 0.5039 MVATAATASFTPVPSPDTGRGKPTKFGSVSVGGLKPKQGNGRLQVKAQAQAAPKAKGAVVEDELASSASLSHAPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVQDGLVFRQNFSIRSYEIGADKTASIDTIMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDKYPTWGDVVQVDTWVSASGKNGMRRDWLVRDIKTGEVYARASSVWVMMNKHTRRLSKIPEEVRGEISCYFVDSAPVVEEDNRKLPKLDDTANFIRTGLSPRWNDLDVNQHVNNVKYVGWILESAPQPLLESHELCAMTLEYRRECGRDSAMTLEYRRECGRNSVLDSLTDVSGADTGNIGDGGLFECKHLLRLEDGAEIVRGRTGWRPKPGNNLGVFSQVTAENI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00734 423 CDD 4HBT 131 247 - -
Cca03g00734 423 Gene3D Hotdog Thioesterase 348 411 - -
Cca03g00734 423 Gene3D Hotdog Thioesterase 121 347 - -
Cca03g00734 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 289 404 IPR029069 -
Cca03g00734 423 MobiDBLite consensus disorder prediction 1 41 - -
Cca03g00734 423 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 349 - -
Cca03g00734 423 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 348 409 - -
Cca03g00734 423 Pfam Acyl-ATP thioesterase 1 117 IPR021113 GO:0016790
Cca03g00734 423 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 348 409 IPR045023 GO:0006633|GO:0016297
Cca03g00734 423 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 349 IPR045023 GO:0006633|GO:0016297
Cca03g00734 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 125 277 IPR029069 -
Cca03g00734 423 Pfam Acyl-ACP thioesterase 128 348 IPR002864 GO:0006633|GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00734 Cca-Chr3 14949182 14953996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00734 1 407 Acyl Lipid Metabolism Gene Families AT1G08510 70.913 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00734 K10781 - gmx:100797796 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00734 03 14949182 14953996 Cca03g00734 03 14949182 14953996 ECH