Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00733 ATGGGTCCAAATTGCGTGCATCTAGCGGCGTTAACGTTCCTTCTCGTGCTGCTAAGTGTGGGTTCGCGCGGTTCTGCTTGGGTAGGCGTGAACTGGGGAACCATGGCGACGCACCAGCTTCCAGCGGAGAAGGTGGTGAAGATGCTGAGGGAAAATGGGTTCACCAAATTGAAGCTGTTTGACGCGGATGAGTTGATTATGGCGGCGCTCATGGGGAGTGATATCGAAGTGATGGTGGCAATACCCAACAACATGCTCCACAAGATAAGTAACAGTCCCAAAGCTGCGGATTCTTGGGTGCGTGATAATGTCACCAGTTACTTGTTCACCGGTGGTGTCAAAATCAAGTATGTTGCCGTTGGTAATGAGCCTTTCCTTAAAGCGTATAATGGCACCTATGCGAAGAAAACTCTGCCAGCCCTTAAGAATATACAGAGATCACTTGATAATGCGGGTTTGGGTTCAAAGGTCAAAGTCACTGTTCCATTCAATGCTGACATTTACTATTCACCTGATTCAAATCCGGTGCCATCAGCTGGTGACTTCAGGCCTGAATGGCGAGATCTCACTATTGAAATAATCCAATTCTTATATGCAAACAATGCACCTTTCACAGTCAACATCTACCCTTTCCTTAGTCTTTATGGCAACCAAGATTTCCCTTTTGATTTTGCATTCTTTGATGGATATAACAAGCCTCTTAGGGATGGTAAGGCTCTTTACACCAATGTGTTTGGTGCAAATCTTGATACCCTTCTGTGGTCTTTGGACAAGGCAGGATATCCTGACCTGAAGGTTATAATTGGAGAAATTGGGTGGCCAACTGATGGTGATAAGAATGCTAATGCAAGGAATGCAAGGAGATTCAACTTGGGTTTGCTTAAACATGCTCTGAGTGGAAAGGGTACCCCTAAAAGGAATGGCACAGTTGACTTGTTTCTATTCAGCCTCATTGATGAGAACACTAAGAGTGTTGCTCCAGGGAACTTTGAGAGGCATTGGGGGATTTTTGAGTTTGATGGCAAGCCAAAGTATGAATTAGACTTAACAGGTCAACACAAGGAAAAGGGTCTTATCCCTGTGGAAGGTATAAAGTACTTGGAAAAGAGGTGGTGTATTTTGGATCCAGATGTTACTGACTTGGATGATTTGGCCAAGAGCATTGACTATGCTTGTAGCCTTTCCGATTGTACTTCCCTTGGCTATGGCTCTACTTGTAGTAATCTGAATCTCCAAGGGAATGCATCTTATGCTTTCAATATGTATTATCAAGTAAATAACCAAAAGGATTGGGACTGTGATTTCTCTGGTTTGGCTATCATCACAAATGAGGATCCATCAGAAAATGGCTGCCAATTCCCTGTGATGATCGCTCGTAGTTCTTCTTTGCTACTGCATGGAGGGATTTCAGACATCCTTAAGAAAGCAATGAGGTTATATATTTTTGTCATGTTTTTGCTATAG 1464 0.4351 MGPNCVHLAALTFLLVLLSVGSRGSAWVGVNWGTMATHQLPAEKVVKMLRENGFTKLKLFDADELIMAALMGSDIEVMVAIPNNMLHKISNSPKAADSWVRDNVTSYLFTGGVKIKYVAVGNEPFLKAYNGTYAKKTLPALKNIQRSLDNAGLGSKVKVTVPFNADIYYSPDSNPVPSAGDFRPEWRDLTIEIIQFLYANNAPFTVNIYPFLSLYGNQDFPFDFAFFDGYNKPLRDGKALYTNVFGANLDTLLWSLDKAGYPDLKVIIGEIGWPTDGDKNANARNARRFNLGLLKHALSGKGTPKRNGTVDLFLFSLIDENTKSVAPGNFERHWGIFEFDGKPKYELDLTGQHKEKGLIPVEGIKYLEKRWCILDPDVTDLDDLAKSIDYACSLSDCTSLGYGSTCSNLNLQGNASYAFNMYYQVNNQKDWDCDFSGLAIITNEDPSENGCQFPVMIARSSSLLLHGGISDILKKAMRLYIFVMFLL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00733 487 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Cca03g00733 487 Pfam X8 domain 371 439 IPR012946 -
Cca03g00733 487 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 477 IPR044965 GO:0004553|GO:0005975
Cca03g00733 487 SMART X8_cls 370 453 IPR012946 -
Cca03g00733 487 Gene3D Glycosidases 27 357 - -
Cca03g00733 487 SUPERFAMILY (Trans)glycosidases 28 347 IPR017853 -
Cca03g00733 487 Pfam Glycosyl hydrolases family 17 28 348 IPR000490 GO:0004553|GO:0005975
Cca03g00733 487 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 8 477 - -
Cca03g00733 487 Gene3D - 366 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00733 Cca-Chr3 14740059 14742678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00733 28 457 Miscellaneous Gene Families AT1G64760 57.442 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00733 - - gmx:100781894 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00733 03 14740059 14742678 Cca03g00733 03 14740059 14742678 ECH