Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00728 ATGTACTCAAGTCCCATTTGGGAACCAAATTACCAAACCATTCTTACTTGTGTGAAGGATTACATGATAATCAGAGTGAGCTTCATGGTTGTAGCTTCGGTTGCTGCACTCAAGATTTCGCAGACAAAATCCACTTCTTCCACAAAGAGAAACGGTTCAATAAAATCTCAAGGAAGTGATGGGTCACACTTGGAACAAGAGTTTGAAGAGAGGGAAAATAACATTTCTAAGGCTAATCATGTTCTACAGAGTGAAGAGGAGCAGAATAACTCTGGAATGCCACAAAATCTGATAAAAGGGGAATTTAAGGGCTTGGAGCTGTTAGTAGGTGGTGAGAAAATCCACAATGTTACTGAAAAAGAGGTACTGCAGAATTTAATACGAAATTACAAGCAAAGAGAAGTAAACCTTGAAAGGAAGCTTCTTGAATTGAATGCACTAAGAGAAGAACATTCAGCCATTGTCCAAATGCAGAAGCAATTAGATGAAAAGACAGAAAAATTGGACTTTCTTAAGAAGACCATTGCTTCCTTACAGTCAGAGAATACAAGTATTCTAGAAAAAGTAAGAGAGGATCTCTTGTCAAAAAAAGAGCTAGATATTACAAATAAAATGATAAATGAGATGAAAAGGAAGAAGGAGGATGTTGTGAGGAAGCAAATATTGATGCTCCAACAGCAAGTAACTGAATTTCAGAAGCATAATAGTTCAGGTAGAAATGCTACTGCAAATAAGAAACTTAAAGAAGTTCAAGGCATGGAGGTAGAGGTTTTGGAACTGAAGAGGAGAAATAAAGAGCTTGAGTTGGAAAAAAGAGAGATGGGAATTAAGTTGGTCACTGCCCAAGCAAGAATCAGAACAGAGCTTCTGCAGGAGGAAAGAGGTGCCCGAATAAACGAAGAAATCACTGGTTTACGTCAAGTGCATGAAGAACTTTCAGAACAAGTTGAAAGATTGCAGAGAAACAGATTTGACATGGTTGAGGAACTTGTGTACCAACGGTGGCTTTACTCTTTGTTGAGGTTCGAAGTCCAGGATCATCAAAAACAAAGTAGAAAGGCCTCGAGAAGAGATTGCAGCCAGAATTCAAACAAAGAACTGTGTGGGGAAAAGCATGCATCAGTATCTGATCTTGAGATTGAAAGCGTATCTTCTAATGCCACATTGGATGAGAATGAGAGTGATGAAATTGAAACTAATACTACCTTTGAAAGCTCCTCCAGTAGCCAAAGTAGTGGCAGCAGCAGCATAAAAATGAAGAGTTGGAGGAAAATCAAAGATTTTTCTAACAAAATTTCATCAAAGGGTAGGAATTTTGCGAGCAGCCCTGGCATGACACGTAGGTTTTCTATGTCAATGGTTGAATCAGATAGTGTTAATAGTCCAGTGATCAACCTATCCCAAACTGAGAATAGTACATTCAAATCATTAGAGAGTCCTATAATGTCAAAAATTAAGAGGGTCTCTTTTAGTGATTCAGTTAAATTATCTACATATCAAGATATGGCAGAGGAAGTTGAGAATAATACAGTAGATGACAAAGAAACAAGGTGTGAGCAGATCATGGAGCTGGCTTCAAGTGTTAAGAGCTTCACCAACATTGATTCCATTGAAGAGAATGAAGGTGGCAAGAATAATAAAACTGGTCATTCAGATGAAGTGTATTCAAGGAATGAGCCCATGTCTAGAAAGGATAACTGGATCAAAACCATGTTGGTGCAGCTGGTAGCATTTTTATTCTTTTCACTTATCCTGCTAGCATGTTTCATGATCAAATAA 1779 0.3794 MYSSPIWEPNYQTILTCVKDYMIIRVSFMVVASVAALKISQTKSTSSTKRNGSIKSQGSDGSHLEQEFEERENNISKANHVLQSEEEQNNSGMPQNLIKGEFKGLELLVGGEKIHNVTEKEVLQNLIRNYKQREVNLERKLLELNALREEHSAIVQMQKQLDEKTEKLDFLKKTIASLQSENTSILEKVREDLLSKKELDITNKMINEMKRKKEDVVRKQILMLQQQVTEFQKHNSSGRNATANKKLKEVQGMEVEVLELKRRNKELELEKREMGIKLVTAQARIRTELLQEERGARINEEITGLRQVHEELSEQVERLQRNRFDMVEELVYQRWLYSLLRFEVQDHQKQSRKASRRDCSQNSNKELCGEKHASVSDLEIESVSSNATLDENESDEIETNTTFESSSSSQSSGSSSIKMKSWRKIKDFSNKISSKGRNFASSPGMTRRFSMSMVESDSVNSPVINLSQTENSTFKSLESPIMSKIKRVSFSDSVKLSTYQDMAEEVENNTVDDKETRCEQIMELASSVKSFTNIDSIEENEGGKNNKTGHSDEVYSRNEPMSRKDNWIKTMLVQLVAFLFFSLILLACFMIK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00728 592 MobiDBLite consensus disorder prediction 350 418 - -
Cca03g00728 592 MobiDBLite consensus disorder prediction 537 557 - -
Cca03g00728 592 MobiDBLite consensus disorder prediction 540 557 - -
Cca03g00728 592 Coils Coil 302 329 - -
Cca03g00728 592 MobiDBLite consensus disorder prediction 399 418 - -
Cca03g00728 592 Coils Coil 120 188 - -
Cca03g00728 592 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 22 591 IPR040265 -
Cca03g00728 592 Coils Coil 68 88 - -
Cca03g00728 592 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 22 591 - -
Cca03g00728 592 MobiDBLite consensus disorder prediction 45 61 - -
Cca03g00728 592 Coils Coil 243 284 - -
Cca03g00728 592 MobiDBLite consensus disorder prediction 45 71 - -
Cca03g00728 592 MobiDBLite consensus disorder prediction 350 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00728 Cca-Chr3 14320664 14323792 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00728 - - ccaj:114916496 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00728 03 14320664 14323792 Cca03g00728 03 14320664 14323792 ECH