Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00725 ATGGATGTGAAGAATATTGTGGTGGTTGTGGAAGATGTGGAAGCAGCAAGAACTGCTCTACAATGGGCACTTAGAAACATCATTCGCTATGGTGACATAATCACCCTTCTCCATGTCTACTACCACTCCACAAGATCAAGAAGCAGAACCAAAGCACGTCTTCTTCGACTCAATGGCTTCAAATTGGCCCTTTCCTTTCAAGACATGTGCAACAACTACCCCAATACAAAGGTTGAAATCATTGTCACGGAAGGGGACCAAGAAGGAACCAAGATCGCTGCCACGGTGCGAGAGATTGGAGCCTCCATGCTTGTGGTTGGACTCCATGATTCTAGTTTTCTTTACAAAATGGCAATGGGCCATTCCCATAATGGCATAGCCAGCATTTTCAACTGCAGAGTACTTGCCATCAAGCAACCTCATGCGTCACCAATGAGGCCCATGATATCTTCAGTGTCTGTGCTAGACAGTTCAACCAACATGGATTTTTCACAAATTCATGTTTCTAGATTACAAGTCCCTCCTACCTCTCCACCAAAAATTCCATACCGTATATGTCCTAACCCATCTGCAATTATTTGGAGATCAAGGAAATCTAGGAGAAGGTGA 609 0.4417 MDVKNIVVVVEDVEAARTALQWALRNIIRYGDIITLLHVYYHSTRSRSRTKARLLRLNGFKLALSFQDMCNNYPNTKVEIIVTEGDQEGTKIAATVREIGASMLVVGLHDSSFLYKMAMGHSHNGIASIFNCRVLAIKQPHASPMRPMISSVSVLDSSTNMDFSQIHVSRLQVPPTSPPKIPYRICPNPSAIIWRSRKSRRR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00725 202 CDD USP_Like 17 120 - -
Cca03g00725 202 Pfam Universal stress protein family 4 138 IPR006016 -
Cca03g00725 202 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 202 - -
Cca03g00725 202 Gene3D HUPs 2 144 IPR014729 -
Cca03g00725 202 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00725 Cca-Chr3 14250955 14253483 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00725 - - gmx:100778166 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00725 03 14250955 14253483 Cca03g00725 03 14250955 14253483 ECH