Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00722 ATGCCGAAGGAGGAGCGCCCACACGACACGTTAACGGCGAAGATGAAAGCGCTTCTTGCGTTGTACGAGAAGCACAAGCAGAAGCACGGCGCTGCCGCGTTAATTCCTCCCAAGAACCCTTCTTTGAAGGCAAACGAGACGCGCATTCTCGTCTTCGTGAGGGTGAGGCCGTTGGCGAAGAAGGAAACGGAAGCGGGTTCACGGTGCTGCGTCAGAGTCGTCGATCGCCGTGACGTCTTTCTGACGGAGTTTGCCTCCGAGAAGGATTACCTCCGCTTGAAGAGGCTTCGCGGTCGCCATTTCGCCTTCGATGCTTCCTTTCCCGATTCGGCTTCTCAACAAGAAGTTTATTCCACCACAACCTCAGAACTTGTGGAGGCAGTTCTGCAAGGGAGGAATGGGTCAGTTTTCTGTTATGGTGCCACTGGAGCTGGAAAAACTTACACAATGCTTGGTACAGTGGAGAGTCCTGGTGTGATGGTGTTGGCAATTAAGGATCTGTTCAGTAAAATCAGGATGAGAAGTTGTGACGGAAACCATGTGGTTCATCTGTCCTATCTTGAGGTTTATAATGAAACTGTCAGGGATTTGCTTTCACCTGGAAGACCTCTGATTCTCAGAGAAGATAAACAGGGGATTATTGCAGCTGGTCTTACACAATACCGAGCTTATTCCACTGATGAAGTGATGATATTGCTTCAACAAGGAAATAAGAACAGAACCACAGAACCAACTCGTGCAAATGAAACATCTTCACGCTCCCATGCTATTTTGCAGGTTGTGGTTGAGTACCAAGTTAAAGATGCTGCAATGAATATTATTAACAAAATCGGCAAGCTCTCACTGATTGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACAGATCAAAGAACAGTTAGATCTCTTGAAGGTGCCAATATAAACCGGTCTCTCCTGGCACTAAGCAGCTGCATTAATGCTCTTGTAGAAGGCAAGAAACACATACCATACAGAAATTCAAAACTCACTCAACTTCTCAAGGACTCATTAGGAGGAACTTGCAACACTGTCATGATTGCAAATATAAGCCCAAGTAACCTCTCATTTGGTGAAACTCAGAACACCCTTCATTGGGCTGATAGGGCCAAGGAGATTCGAACAAAGGCAACTAATGCAAATGAGGATCTATTGTCAGTACCTGAGACGGAAACAGACCGGGCCAAGCTAGTACTCGATCTGCAAAAGGAGAATTGTGAATTGCGAATGCAGCTAGCACGGCAGCACCAGAAGCTTATGACACTCCAAGCAGAGTCTCTAGCCCCCCCAACACCACCTTCAGCTACATCTCTTCTTTCCACTCCTCCAACTTCTGCCCGACCAAATGAAAAACTAAGGACCAGATCCTCTTTCATAGCCGCAACTGAGACCAAAAGCAAGGGAGATGAGGTGGCTGTCACAATCAGAACAATTCAACAAAGAGTAAAAGCCTTGGAGGCAGAACTAGAGAAAGTGAAAAAGAATCACAGCTTGCAGCTAAAGCAGAAAGATGATGTCATTCGTGAGCTTTCACAAAAGGGTGGGAAAAAAGTGGTAGCAGCAAGGGCTAGTCTACGGCCAAAAGTGGCAAACACCGGAGAATTGAAGAGTCCTAGCCATCGATTTCGGTCACCAGTATCAACTGCGAAGAAACGAAGCTTTTGGGACATAACGGCTGCGAATAGCCCATCAGTTACCACATTGAATGGGAGAAAAACTAGAAGTCATGTTATTTCTGAACCTACTGCACCTTCATCTATGCTTCTTCAGCCTGGATTTGCTAGACAAAAGGGCGTTATTTAA 1818 0.4642 MPKEERPHDTLTAKMKALLALYEKHKQKHGAAALIPPKNPSLKANETRILVFVRVRPLAKKETEAGSRCCVRVVDRRDVFLTEFASEKDYLRLKRLRGRHFAFDASFPDSASQQEVYSTTTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVESPGVMVLAIKDLFSKIRMRSCDGNHVVHLSYLEVYNETVRDLLSPGRPLILREDKQGIIAAGLTQYRAYSTDEVMILLQQGNKNRTTEPTRANETSSRSHAILQVVVEYQVKDAAMNIINKIGKLSLIDLAGSERALATDQRTVRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGTCNTVMIANISPSNLSFGETQNTLHWADRAKEIRTKATNANEDLLSVPETETDRAKLVLDLQKENCELRMQLARQHQKLMTLQAESLAPPTPPSATSLLSTPPTSARPNEKLRTRSSFIAATETKSKGDEVAVTIRTIQQRVKALEAELEKVKKNHSLQLKQKDDVIRELSQKGGKKVVAARASLRPKVANTGELKSPSHRFRSPVSTAKKRSFWDITAANSPSVTTLNGRKTRSHVISEPTAPSSMLLQPGFARQKGVI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00722 605 ProSitePatterns Kinesin motor domain signature. 278 289 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca03g00722 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 423 IPR027417 -
Cca03g00722 605 MobiDBLite consensus disorder prediction 431 456 - -
Cca03g00722 605 PANTHER KINESIN-LIKE PROTEIN 38 598 - -
Cca03g00722 605 PANTHER KINESIN-RELATED 38 598 IPR027640 GO:0003777|GO:0007018
Cca03g00722 605 Coils Coil 8 28 - -
Cca03g00722 605 SMART kinesin_4 46 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g00722 605 Coils Coil 480 507 - -
Cca03g00722 605 ProSiteProfiles Kinesin motor domain profile. 48 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g00722 605 Pfam Kinesin motor domain 54 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g00722 605 PRINTS Kinesin heavy chain signature 131 152 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g00722 605 PRINTS Kinesin heavy chain signature 245 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g00722 605 PRINTS Kinesin heavy chain signature 279 297 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g00722 605 PRINTS Kinesin heavy chain signature 328 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g00722 605 Gene3D Kinesin motor domain 40 384 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00722 Cca-Chr3 14177372 14182221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00722 37 430 Miscellaneous Gene Families AT4G39050 36.098 2.25e-58 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00722 K10401 - gmx:100815524 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00722 03 14177372 14182221 Cca03g00722 03 14177372 14182221 ECH