Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00715 ATGGCTCACAAATCGCTAAGCTCTATCAGTGTGTCCGAAATTGAATCCCACGGAATCACGAGAGAAGATGCTGCCACTATCCACCAAAGTCTCACGGAAATAATTGGAATTCACGGAGACAACACCCCCGCCACGTGGCAGCACATCAGCAACATCGTCCTCAAGCCTGAACTCCCCTTCTCCTTCCATCAGATGCTGTACTATGGTTGCTACAAGGATTACGGTTCCGACCCACCTTCTTGGATACCCGACCCGGAAAGTGCTGCCTTGACTAATGTTTGGCAGTTGCTAGAGAGGACGGGTGAAGAGTTTCTGGGTTCGGCATATAAGGATCCAATTGCAAGCTTTGATGATTTCCAGAAATTTTCAGTCTCAAACCCTGAGATATATTGGAAATGTGTGCTGGATGAGATGAACATATCATTTACCAAACCACCTGAATGCATCTTACGTGATAGCCCAATATCACACCCAAGTGGTCAATGGCTTCCTGGAGCATCAATTAATCCAGCACAGAATTGCTTAAATATAAATGGCAAAAGAGGTTTGAATGATACAGTAATAATATGGCGTGATGAACATCCTGATGATCCCCCTTTACAAAGGATGACACTTGAGGAATTGCGTGAAGAAGTTTGGTTAGTTGCATATGCTCTCAAAGCTCTGGGTCTGGAGAAAGGATCTGCAATTGCAATTGATATGCAAATGAATGTCACATCTGTGGTTATCTACCTAGCTATCATTCTTGCAGGTTATGTTGTTGTATCAATTGCTGATAGTTTTGCAGCTAGTGAAATATCAACCAGGCTTAAAATATCAAAAGCAAAAGCCATATTTACTCAGGATCTCATTATTCGTGGCGACAAAAGTATCCCTCTTTACAGTAGAGTTGTGGATGCACAGTCACCTATGGCAGTAGTTATCCCTGCCAAAGGATTTGAGTTTAGCATGAAACTGCGCAATGGTGACCTTTCTTGGCATGATTTTTTGGGGAAAGTCAATAATCTCAAAGGCAAGGAATTTGTAGCTACAGAGCAACCAGTAGAAACATTAACAAACATTATTTTTTCTTCTGGAACAACAGGTGATCCAAAGGCAATTCCATGGACCAATGTTACTCCTCTAAAAGCTGCTGCAGATGCATGGTGCCACATGGACGTTCGTAAAGGTGATGTAGTGTGCTGGCCCACTAATCTTGGATGGATGATGGGGCCATGGCTAGTATATGCATCATTGCTAAATGGAGCTTCAATGGCTTTGTATAACGGATCCCCGCTGGGGTCTGGCTTTGCCAAGTTTGTACAGGATGCTAAAGTAACAATGCTTGGTGTTATTCCAAGTATTGTACGGAGTTGGAGAAGTGCCAATTCCACATCTGGCTATGATTGGTCTTCCATCCGTTGCTTTAGCTCCTCTGGTGAAGCATCTAATGTTGATGAATATCTTTGGCTGATGGGGAGCGCTCTCTACAAGCCTGTTATTGAATATTGTGGTGGTACAGAAATTGGGGGTGGATTTGTTTGTGGATCACTACTACAGGCCCAGTCATTGGCTGCTTTTAGCACACCAGCTATGTGCTGCAGTTTGTTTATTCTCGATGATGATGGCCTTCCTATGCCACAAAATGTTCCCGGAATAGGTGAGTTGGCTCTTGCTCCCCTCATGCTTGGGGCATCAAATACACTGTTGAATGCAGACCATTATGGTGTCTATTTCAAAGGAATGCCTCTCTTGAATGGAAAGTTTTTACGGAGGCATGGAGATGTCTTTGAGCGTACTTCTAGAGGATACTATCATGCACATGGTCGTGCAGATGACACGATGAACCTTGGGGGAATCAAGGTGAGTTCGGTTGAGATTGAACGCATATGCAATGGGGTAGATAGCAATATTCTGGAAACAGCTGCAATAGGAGTACCACCTTCTGGTGGGGGCCCTGAGTTGTTGACTATAGCTGTTGTATTCAAGGATTCAAATAGCACAAAACAAGATTTACACCAATTGAGGACGTCTTTTAATTCAGCTCTACAAAAGAAACTAAATCCACTGTTCAAGGTTTCTCAAGTAGTAACACTGCCTTCTCTTCCAAGGACGGCATCAAACAAGGTTATGAGAAGGGTTTTGCGGCAGCAGCTTAGCGACCAAAGTTCTAAAATATAA 2160 0.4343 MAHKSLSSISVSEIESHGITREDAATIHQSLTEIIGIHGDNTPATWQHISNIVLKPELPFSFHQMLYYGCYKDYGSDPPSWIPDPESAALTNVWQLLERTGEEFLGSAYKDPIASFDDFQKFSVSNPEIYWKCVLDEMNISFTKPPECILRDSPISHPSGQWLPGASINPAQNCLNINGKRGLNDTVIIWRDEHPDDPPLQRMTLEELREEVWLVAYALKALGLEKGSAIAIDMQMNVTSVVIYLAIILAGYVVVSIADSFAASEISTRLKISKAKAIFTQDLIIRGDKSIPLYSRVVDAQSPMAVVIPAKGFEFSMKLRNGDLSWHDFLGKVNNLKGKEFVATEQPVETLTNIIFSSGTTGDPKAIPWTNVTPLKAAADAWCHMDVRKGDVVCWPTNLGWMMGPWLVYASLLNGASMALYNGSPLGSGFAKFVQDAKVTMLGVIPSIVRSWRSANSTSGYDWSSIRCFSSSGEASNVDEYLWLMGSALYKPVIEYCGGTEIGGGFVCGSLLQAQSLAAFSTPAMCCSLFILDDDGLPMPQNVPGIGELALAPLMLGASNTLLNADHYGVYFKGMPLLNGKFLRRHGDVFERTSRGYYHAHGRADDTMNLGGIKVSSVEIERICNGVDSNILETAAIGVPPSGGGPELLTIAVVFKDSNSTKQDLHQLRTSFNSALQKKLNPLFKVSQVVTLPSLPRTASNKVMRRVLRQQLSDQSSKI 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00715 719 Pfam AMP-binding enzyme 197 610 IPR000873 -
Cca03g00715 719 Pfam Acetyl-coenzyme A synthetase N-terminus 117 174 IPR032387 -
Cca03g00715 719 SUPERFAMILY Acetyl-CoA synthetase-like 106 715 - -
Cca03g00715 719 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 716 - -
Cca03g00715 719 Gene3D - 606 719 IPR045851 -
Cca03g00715 719 Gene3D - 102 605 IPR042099 -
Cca03g00715 719 ProSitePatterns Putative AMP-binding domain signature. 354 365 IPR020845 -
Cca03g00715 719 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00715 Cca-Chr3 13813071 13822633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00715 1 584 Acyl Lipid Metabolism Gene Families AT5G23050 67.406 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00715 - - gmx:100795985 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00715 03 13813071 13822633 Cca03g00715 03 13813071 13822633 ECH